Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5601 |
Symbol | |
ID | 3717677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6274387 |
End bp | 6275535 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_351329 |
Protein GI | 77461822 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.312913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.923094 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCAC CTGTCGTAAT CGTTGGCACC GGGCTTGCGG GTTACAACCT GGCCCGCGAG TTTCGCAAAC TCGATGGCGA AACCCCGTTG CTGCTGATTA CCGCCGATGA CGGTCGCTCC TACTCCAAGC CGATGCTGTC CACCGGCTTC GGCAAGAACA AGGACGCCGA CGGCTTGAGC ATGGCCGAGC CGGGCGCGAT GGCCGAGCAG TTGAAGGCCG AGATCCGCAC CCATACCCGC ATCAGCGGCA TCGATCCGGG CCACAAGCGG CTGTGGATCG GCGAGGAAGC GGTGAGCTAT CGCGACCTGA TCCTCGCCTG GGGCGCCGAA ACCGTGCGCG TGCCGATCGA AGGCGACGGC GGGGATCTGG TGTTCCCGAT CAACGATCTC GAAGACTACG CGCGCTTTCG CGCCGCAGCG GCCGGCAAGC GTCGGGTGTT GCTGCTCGGC GCCGGACTGA TCGGCTGCGA GTTCGCCAAT GACCTGATTC TGGGCGGCTA CGAGGTGCAG CTGGTCGCGC CGTGCGAACA GGTCATGCCG ACTCTTCTGC ATCCCGCGGC GGCGGCTGCG GTGCAGGCCG GGCTGGAAAG CCTCGGTGCA CGTTTCCACC TCGGCCCGGT GCTGACCCGC CTGCAAAAAG TCGCGGATGG GCTGGAAGCG CACCTGTCCG ACGGTCAGGT TGTCCCGTGC GATGTGGTGG TCTCGGCCAT CGGCCTGCGC CCGCGGATCG ACCTGGCGGC AGCCGCCGGC ATCCAGACCA ATCGCGGCGT GGTGGTCGAC CGTCATCTGC AAACCTCGCA CGCCAACATT TACGCTTTGG GCGACTGCGC CGAGGTCGAC GGGCTGAATC TTCTGTACGT CATGCCCCTC ATGAGTTGTG CGCGAGCGCT GGCACAAACC CTGGCCGGCA ACCCGACCGT GGTGAACTAT GGACCGATGC CGATCACCGT GAAAACCCCG GTCTGCCCAC TGGTGGTTTC CCCGCCGCCT CGGGGCCGCG AGGGTGTTTG GACCGTTGAG GGGCAGGGCG CCGATATCAA GGTGTTGTGC CACGACGCAG AAGGGCAATT GCTCGGTTAC GCCCTGACCG GCGCGGCGGT GATGGAAAAA CTCGCACTGA ACAAACAGCT TCCGGCCTTG CTGGCGTAA
|
Protein sequence | MSAPVVIVGT GLAGYNLARE FRKLDGETPL LLITADDGRS YSKPMLSTGF GKNKDADGLS MAEPGAMAEQ LKAEIRTHTR ISGIDPGHKR LWIGEEAVSY RDLILAWGAE TVRVPIEGDG GDLVFPINDL EDYARFRAAA AGKRRVLLLG AGLIGCEFAN DLILGGYEVQ LVAPCEQVMP TLLHPAAAAA VQAGLESLGA RFHLGPVLTR LQKVADGLEA HLSDGQVVPC DVVVSAIGLR PRIDLAAAAG IQTNRGVVVD RHLQTSHANI YALGDCAEVD GLNLLYVMPL MSCARALAQT LAGNPTVVNY GPMPITVKTP VCPLVVSPPP RGREGVWTVE GQGADIKVLC HDAEGQLLGY ALTGAAVMEK LALNKQLPAL LA
|
| |