Gene Pfl01_5601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5601 
Symbol 
ID3717677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6274387 
End bp6275535 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content65% 
IMG OID 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_351329 
Protein GI77461822 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.312913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.923094 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAC CTGTCGTAAT CGTTGGCACC GGGCTTGCGG GTTACAACCT GGCCCGCGAG 
TTTCGCAAAC TCGATGGCGA AACCCCGTTG CTGCTGATTA CCGCCGATGA CGGTCGCTCC
TACTCCAAGC CGATGCTGTC CACCGGCTTC GGCAAGAACA AGGACGCCGA CGGCTTGAGC
ATGGCCGAGC CGGGCGCGAT GGCCGAGCAG TTGAAGGCCG AGATCCGCAC CCATACCCGC
ATCAGCGGCA TCGATCCGGG CCACAAGCGG CTGTGGATCG GCGAGGAAGC GGTGAGCTAT
CGCGACCTGA TCCTCGCCTG GGGCGCCGAA ACCGTGCGCG TGCCGATCGA AGGCGACGGC
GGGGATCTGG TGTTCCCGAT CAACGATCTC GAAGACTACG CGCGCTTTCG CGCCGCAGCG
GCCGGCAAGC GTCGGGTGTT GCTGCTCGGC GCCGGACTGA TCGGCTGCGA GTTCGCCAAT
GACCTGATTC TGGGCGGCTA CGAGGTGCAG CTGGTCGCGC CGTGCGAACA GGTCATGCCG
ACTCTTCTGC ATCCCGCGGC GGCGGCTGCG GTGCAGGCCG GGCTGGAAAG CCTCGGTGCA
CGTTTCCACC TCGGCCCGGT GCTGACCCGC CTGCAAAAAG TCGCGGATGG GCTGGAAGCG
CACCTGTCCG ACGGTCAGGT TGTCCCGTGC GATGTGGTGG TCTCGGCCAT CGGCCTGCGC
CCGCGGATCG ACCTGGCGGC AGCCGCCGGC ATCCAGACCA ATCGCGGCGT GGTGGTCGAC
CGTCATCTGC AAACCTCGCA CGCCAACATT TACGCTTTGG GCGACTGCGC CGAGGTCGAC
GGGCTGAATC TTCTGTACGT CATGCCCCTC ATGAGTTGTG CGCGAGCGCT GGCACAAACC
CTGGCCGGCA ACCCGACCGT GGTGAACTAT GGACCGATGC CGATCACCGT GAAAACCCCG
GTCTGCCCAC TGGTGGTTTC CCCGCCGCCT CGGGGCCGCG AGGGTGTTTG GACCGTTGAG
GGGCAGGGCG CCGATATCAA GGTGTTGTGC CACGACGCAG AAGGGCAATT GCTCGGTTAC
GCCCTGACCG GCGCGGCGGT GATGGAAAAA CTCGCACTGA ACAAACAGCT TCCGGCCTTG
CTGGCGTAA
 
Protein sequence
MSAPVVIVGT GLAGYNLARE FRKLDGETPL LLITADDGRS YSKPMLSTGF GKNKDADGLS 
MAEPGAMAEQ LKAEIRTHTR ISGIDPGHKR LWIGEEAVSY RDLILAWGAE TVRVPIEGDG
GDLVFPINDL EDYARFRAAA AGKRRVLLLG AGLIGCEFAN DLILGGYEVQ LVAPCEQVMP
TLLHPAAAAA VQAGLESLGA RFHLGPVLTR LQKVADGLEA HLSDGQVVPC DVVVSAIGLR
PRIDLAAAAG IQTNRGVVVD RHLQTSHANI YALGDCAEVD GLNLLYVMPL MSCARALAQT
LAGNPTVVNY GPMPITVKTP VCPLVVSPPP RGREGVWTVE GQGADIKVLC HDAEGQLLGY
ALTGAAVMEK LALNKQLPAL LA