Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5579 |
Symbol | |
ID | 3713495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6250779 |
End bp | 6252110 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_351307 |
Protein GI | 77461800 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCC ATAAAGTCAT CTGGCAGGAA GGCATGCTGC TGCGCCCGCA GCACTTCCAG CACAACGACC GCTACTACGA TCACCAGATG AAGACCCGCA CCCAGTTGCT GGGCGGCTAC ACCTGGGGTT TCCTGAATCT GGAGATCGAC CTGCAGTTCC TCAACATGGG CAAACTGGTG ATCAGTGAAG CCTCGGGGAT CCTGCCGGAC GGCAGCCTGT TCGAACTCGG TGGCAACACC GAGCCGCTGG CGCTGGACGT ACCGCCGAAC ACCGGCAACA TGCCGATCTA CCTGGCGCTG CCGCTGGTCA CCGGTAACCA CATCGAGGCC CGGCGCCCGG AGCAGTCCGA TGTGCTGGCG CGCTACACCG CATATGACGC CGAAGTCGCC GACTCCAACG CCGGTGATGA TTCCGCCAGC CAGGTCAGTT GCGGCCGCCC GGACTTCAAG CTGTTGCTCG GCGAGCAGCA GAGTGACCAG GCTTACGTGA AGCTGAAGAT CTGCGATGTG CTCGACACCA CGCCGGACGG CGTGATCAGC CTCGATCCGG ATTTCGTGCC GACCTACATT CAGGCCCACG CCTCCAGCTA CCTGCTGTCG TGCCTGAAAG AAGTGATCAG CATGCTCGGC CACCGGGGCG ACACCATTGC CGAGCGCATT CGTTCGAACG GCAAGGTCGG CGGCGCGGAA ATCGGCGACT TCATGATGCT GCAACTGATA AACCGCACCG AACTGCTGCT GCGCCACTAC CTGGGCCTGG AGCAGGTTCA CCCGGAAGAG TTGTATCGTA CGCTGCTGAC CATGCTCGGC GATCTGGCGA CGTTCTCCAG CGACAGCAAA CGCCCGCGTC TGGACAGCCG CTACTCCCAC GCCGATCAGG GCGCGAGCTT CCGCAAACTG ATGGAGTCGA TCCGTCAGGT GCTGTCGATG GTGCTGGAAC AGCACGCCAT CGAACTGATC CTGCAAGCGC GTCAGTACGG GATCATCGTG TCGCCGCTGC ACGACCACAA ACTGCTGGGC TCGGCGTCGT TCGTGCTGGC AGCCAGTGCC AACTGCGACT CCGAAGAACT GCGCAACCGC TTGCCTGCGC ACCTCAAGGT CGGCCCGGTG GAGCGCATCC GCCAACTGGT CAACCTGCAC CTGCCGGGGA TCAAGGTCAA ACCGTTGCCG GTGGCCCCGC GGCAGATCGC GTTCCACTCC AACAAAACCT ATTTCATCCT CGAACTCAGT TCCGAAGACC TGGCACAACT CGAGCGCTCC GGCGGCTTCG CGTTCCATGT GTCCGGCGAA TTCGCCGAGC TTGAACTGAA ATTCTGGGCC ATCAGGAACT GA
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Protein sequence | MNTHKVIWQE GMLLRPQHFQ HNDRYYDHQM KTRTQLLGGY TWGFLNLEID LQFLNMGKLV ISEASGILPD GSLFELGGNT EPLALDVPPN TGNMPIYLAL PLVTGNHIEA RRPEQSDVLA RYTAYDAEVA DSNAGDDSAS QVSCGRPDFK LLLGEQQSDQ AYVKLKICDV LDTTPDGVIS LDPDFVPTYI QAHASSYLLS CLKEVISMLG HRGDTIAERI RSNGKVGGAE IGDFMMLQLI NRTELLLRHY LGLEQVHPEE LYRTLLTMLG DLATFSSDSK RPRLDSRYSH ADQGASFRKL MESIRQVLSM VLEQHAIELI LQARQYGIIV SPLHDHKLLG SASFVLAASA NCDSEELRNR LPAHLKVGPV ERIRQLVNLH LPGIKVKPLP VAPRQIAFHS NKTYFILELS SEDLAQLERS GGFAFHVSGE FAELELKFWA IRN
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