Gene Pfl01_5485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5485 
Symbol 
ID3713809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6152725 
End bp6153867 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_351213 
Protein GI77461706 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAAA CAGCCTTGCC TAAAGATGAC GTTCAACCTG TGATCGATAC ACCGGTTGAT 
GCACCGCCAC CGGCCGCGGA ACCGCGCCGA GGCAACGGAT TGGCCATTCT CGCGCTGCTG
CTCGGCGCCG CCGGTGTTGC GGTGGGTGGC TGGGGTGTCT GGCAGGTGCG ACATCTGCAG
GCCAACACGC AAAATCAATT GAGTCAGGTT CAGGCATTGA GCGATCAGGC CCAGACCCTG
AAGCTCAACG AGCAACGACT GACCGAGCGC CTCGGGCAAT TGCCTGGCGC CGATGAGCTT
GCTGATCGCC AGCGTCTGGT GTCGCAACTT CAGGGCGATC AGCAGCGCCT CAATCAACGC
CTGGAAACCG TCCTCGGCGC CAGCCGCAAG GACTGGCGCC TGGCCGAGGC CGAGCACTTG
CTGCGTCTGG CCAGCCTGCG TCTTTCCGCC CTGCAGGACA TCAGCAGCGC CCAGGCGCTG
GTCCAGGGTG CCGACGAAAT CCTGCGCGAG CAGAACGATC CCGGCTCGTT CGCCGCCCGC
GAGCAAGTGG CGAAAACTCT TGTAGCGCTG CGCAGTACCG AGCAGCCGGA TCGCACCGGG
CTGTTCCTGC GCCTGGGCGC CTTGCGCGAT CAGGTCGTCG GTCTCACCGA GCTGGCGCCG
GAGTACAAGG ATCGCGGCGA TTCGCTGTTG GGCCTGACTT CCGATGGCGA CGGTGCCAGT
CGTTGGGCGC AGTGGTGGGA TCAGATCTCG CGCTATATCC GCATCGATTT CAACGCCGAC
AAGAACGTCC GGCCGCTGCT CGCCGGCCAG AGCCTGAGCC AGGTGCGTCT GGCCCTGAGC
CTTGCGCTCG AGCAGGCGCA ATGGGCCGCG CTCAACGGTC AGGCGCCGGT GTACACCCAG
GCCCTGGCCG AAGCGCGTGA CGTCCTCACG GGCAACTTCA ACCCGGACAA CCCGCAGAGC
AAAATCATGC TCGAACAGGT CGCGGAACTG AGCAAGCAAC CGGTTACCGT CAACACGCCG
GATCTCACCG GAACCTTGAG CACGGTGCAG GCCTATCTGG AGCGCCGTAA CGTCAACGCC
GAAGACTCGG TGAAACCCTT CGCCAAACCG GCCGCAAGTA CCGCGCAGGA GGCGACACCA
TGA
 
Protein sequence
MSETALPKDD VQPVIDTPVD APPPAAEPRR GNGLAILALL LGAAGVAVGG WGVWQVRHLQ 
ANTQNQLSQV QALSDQAQTL KLNEQRLTER LGQLPGADEL ADRQRLVSQL QGDQQRLNQR
LETVLGASRK DWRLAEAEHL LRLASLRLSA LQDISSAQAL VQGADEILRE QNDPGSFAAR
EQVAKTLVAL RSTEQPDRTG LFLRLGALRD QVVGLTELAP EYKDRGDSLL GLTSDGDGAS
RWAQWWDQIS RYIRIDFNAD KNVRPLLAGQ SLSQVRLALS LALEQAQWAA LNGQAPVYTQ
ALAEARDVLT GNFNPDNPQS KIMLEQVAEL SKQPVTVNTP DLTGTLSTVQ AYLERRNVNA
EDSVKPFAKP AASTAQEATP