| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5478 |
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| Symbol | |
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| ID | 3713860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 6145594 |
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| End bp | 6147504 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | ABC transporter-like |
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| Protein accession | YP_351206 |
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| Protein GI | 77461699 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.882087 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGAC TTCAGAACCT GACTTTACAG CGTGGCCCGC AACGTCTGCT AGAAGACGCC
GAGCTGACCC TGCACGCCGG CCACAAAGCC GGCCTCATCG GTGCCAACGG CGCCGGCAAA
TCCAGCCTGT TCGCCTTGCT CCGCGGTGAG TTGCACCCGG ACTCGGGCGA CTGCCTGCTG
CCGGCCGACT GGCGTATCGC CCACATGCGC CAGGAGGTCG ACACACTCGA GCGTCTGGCG
GTCGACTATG TGCTCGACGG CGACCTGCGC CTGCGCGAAG TGCAGCGTGA GCTCGCGGCA
GCCGAAGAGG CCCACGACGG CACCGCGCTG GCCCGTCTGC ACGCCGAACT CGACAGCGCC
GACGGCTACA CCGCCGATGC GCGTGCACGC AAGTTGCTCG CCGGCCTCGG ATTCACCAAC
GAGCAGATGG ATCGTCAGGT AGGAGATTTC TCCGGTGGCT GGCGGATGCG TCTGAACCTT
GCGCAGGCTT TGATGTGCCC ATCAGACCTG TTGCTGCTCG ACGAACCGAC CAACCACCTG
GATCTCGACG CCATCATCTG GCTCGAAGAG TGGCTGAAAA GTTACCCCGG CACCTTGCTG
CTGATTTCTC ACGACCGGGA CTTCCTCGAT GAAGTGGTCG ATCACGTGGC CCACGTCGAT
CAGCGCAAGC TGACGCTCTA CCGTGGCGGC TACACCGCGT TCGAACGCGC CCGTGCCGAG
CGTCTGGCCC AGCAGCAACA GGCCTACGAG AAGCAACAGG CGCAGCGTGC GCACATGGAA
AGCTACATCG CCCGGTTCAA GGCCCAGGCG ACCAAGGCCC GTCAGGCCCA GAGCCGGATC
AAGGCGCTGG AGCGCATGGA AGAGCTGTCG GCTGCCCACG TCGACTCGCC GTTCGATTTC
GTGTTCCGCG AGTCGACCAA GATCTCCAGC CCGCTGATCG ATCTGTCCGA TGCACGTCTG
GGTTATGGCG AGAAAACCGT GCTGGAGAAG GTCAAGCTGC AACTGACCCC CGGCGCGCGG
ATCGGCTTGC TCGGCCCCAA CGGCGCGGGT AAATCGACCC TGATCAAGAA CCTTGCCGGC
GAGCTGTCAC CGCTGGCCGG GCGCCTGACT CGCGGTGAGA ACACCGTGGT CGGTTACTTC
GCTCAGCATC AACTCGACTC GCTGGATTCC AAGGCCAGCC CGTTGCTGCA CTTGCAGCGT
CTGGCGCCGA CCGAGCGCGA GCAGACCCTG CGCGATTTCC TTGGTGGTTT CGACTTCCGT
GGCGCACGGA TCGACGAACC GGTGCTGAAT TTCTCCGGTG GCGAAAAGGC CCGTCTGGCC
CTGGCGCTGA TCGCCTGGGA ACGGCCGAAC CTGCTGCTGC TCGACGAACC GACCAACCAC
CTCGACCTGG AAATGCGCCT GGCGCTGACC ATGGCGTTGC AGGAATTCAG CGGCGCGGTG
TTGGTGGTTT CCCACGATCG GCATCTGCTC AAGAGCACCA CCGACAACTT CTTCCTGGTC
GCGGACAGCA AGGTCGAGGA GTTCGATGGC GACCTTGAGG ACTACGCCCG TTGGCTGGTC
GAGTACCGTC AGCGCAACGC CCCGGTCAGC AACACACCGG TCAACCCGGA CAAGACCGAC
AAGAAGGCCC AGCGTCAAGC CGCCGCTGCG TTGCGTCAGC AACTGGCGCC GCACAAGCGC
GAAGCCGACA AGCTCGAAGC CGAGCTCGGC AAGCTGCACG AGAAGTTGGC GAAGGTCGAT
GCCAGCCTTG GCGACAGCGA CCTCTACGAG CCGGCGCGCA AGAACGAATT GCGTGACTTG
CTGGCCGAAC AGGCCAAGCT GAAAGTCCGC GAAGGCGAAC TTGAAGAAGC GTGGATGCAA
GCCCTGGAAA CCCTGGAAAG CATGCAGGCG GAGCTGGAGG CGTTGTCCTG A
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| Protein sequence | MIRLQNLTLQ RGPQRLLEDA ELTLHAGHKA GLIGANGAGK SSLFALLRGE LHPDSGDCLL
PADWRIAHMR QEVDTLERLA VDYVLDGDLR LREVQRELAA AEEAHDGTAL ARLHAELDSA
DGYTADARAR KLLAGLGFTN EQMDRQVGDF SGGWRMRLNL AQALMCPSDL LLLDEPTNHL
DLDAIIWLEE WLKSYPGTLL LISHDRDFLD EVVDHVAHVD QRKLTLYRGG YTAFERARAE
RLAQQQQAYE KQQAQRAHME SYIARFKAQA TKARQAQSRI KALERMEELS AAHVDSPFDF
VFRESTKISS PLIDLSDARL GYGEKTVLEK VKLQLTPGAR IGLLGPNGAG KSTLIKNLAG
ELSPLAGRLT RGENTVVGYF AQHQLDSLDS KASPLLHLQR LAPTEREQTL RDFLGGFDFR
GARIDEPVLN FSGGEKARLA LALIAWERPN LLLLDEPTNH LDLEMRLALT MALQEFSGAV
LVVSHDRHLL KSTTDNFFLV ADSKVEEFDG DLEDYARWLV EYRQRNAPVS NTPVNPDKTD
KKAQRQAAAA LRQQLAPHKR EADKLEAELG KLHEKLAKVD ASLGDSDLYE PARKNELRDL
LAEQAKLKVR EGELEEAWMQ ALETLESMQA ELEALS
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