Gene Pfl01_5463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5463 
Symbol 
ID3714079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6129227 
End bp6130729 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content63% 
IMG OID 
ProductPpx/GppA phosphatase 
Protein accessionYP_351191 
Protein GI77461684 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0273745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAAT CCCAAGCCAA GAATCTGTCC CTGATCGCCG CGATCGACCT GGGCTCCAAC 
AGCTTCCATA TGGTCGTGGC CAAGGCCCAG AACGGCGAAA TCCGTATTCT CGAACGGCTC
GGGGAAAAGG TTCAGCTGGC CGCCGGCATC GACGATGAGC GCCAGCTCAA CGAAGAATCC
ATGCAGCGCG GGCTCGACTG CCTCAAGCGC TTTGCCCAAC TGATCAACGG CATGCCGCTG
GGCGCCGTGC GGATCGTCGG TACCAACGCC CTGCGCGAGG CGCGCAACCG TGGCGAATTC
ATCCGCCGTG CCGAAGAAAT CCTCGGCCAT CCGGTGGAAG TCATCTCCGG CCGTGAAGAG
GCCCGCCTGA TCTACCTCGG CGTGTCCCAC ACCCTCGCCG ACACCCCGGG CAAACGCCTG
GTCGCCGACA TCGGCGGCGG CAGTACCGAA TTCATCATCG GCCAGCGTTT CGAACCGCTG
CTGCGCGAAA GCCTGCAAAT GGGCTGCGTG AGCTTCACCC AGCGCTATTT CAAGGACGGC
AAAATCACCC CGGCCCGCTA CGCCCAGGCC TACACGGCGG CGCGGCTGGA AATCATGAGC
ATCGAACACG CCTTGCATCG CCTGACCTGG GATGAAGCCA TCGGCTCCTC GGGCACCATC
CGCGCCATCG GCCTGGCGCT GAAGGCCGGC GGTCACGGCA CCGGCGAAGT GAATGCCGAA
GGTCTGGCGT GGCTCAAGCG TCGCCTGTTC AAGCTCGGCG ATGTCGACAA GATCGATTTC
GAAGGCATCA AGCCGGATCG TCGGGCGATC TTCCCGGCCG GTCTGGCGAT TCTCGAAGCG
ATCTTCGACG CCCTCGAACT GCAACGCATG GATCACTGCG AAGGCGCGCT GCGTGAAGGC
GTACTTTACG ACCTGCTCGG CCGCCATCAC CACGAAGACG TGCGCGAACG TACTCTGACC
TCGCTGATGG AGCGCTACCA CGTCGACCTC GAACAGGCCG CGCGGGTCGA GCGCAAAGCC
CTGCACGCGT TCGATCAAGT GGCCGTGGAC TGGGAGCTGG ACGACGGTAT CTGGCGCGAA
CTGCTGGGCT GGGCGGCGAA AGTGCACGAA GTCGGGCTCG ACATCGCTCA CTATCACTAC
CATAAGCACG GTGCCTACCT GATCGAACAC TCGGACCTCG CCGGGTTCTC CCGCGAAGAC
CAGCAGATGC TTGCGCTGCT GGTGCGTGGC CACCGCCGCA ACATCCCCAA GGACAAGTTC
GCCGAGTTCG GAGACGACGG CGACAAGCTG ATCCGTCTGT GTGTGCTGCT GCGTTTCGCC
ATCCTGTTCC ACCACATTCG TGGCACCCAG GCGATGCCGC AGGTTGCGCT GCATGCCAAC
GGCGACAACC TCGATGTGGA GTTTCCGGAG AACTGGCTGG ATGAAAACCA GCTGACCCAG
GCGGATTTCG GGCTTGAGGC CGAATGGCTG ACGCGGGTGG GGATTGTCCT GACCGTGCAT
TGA
 
Protein sequence
MPQSQAKNLS LIAAIDLGSN SFHMVVAKAQ NGEIRILERL GEKVQLAAGI DDERQLNEES 
MQRGLDCLKR FAQLINGMPL GAVRIVGTNA LREARNRGEF IRRAEEILGH PVEVISGREE
ARLIYLGVSH TLADTPGKRL VADIGGGSTE FIIGQRFEPL LRESLQMGCV SFTQRYFKDG
KITPARYAQA YTAARLEIMS IEHALHRLTW DEAIGSSGTI RAIGLALKAG GHGTGEVNAE
GLAWLKRRLF KLGDVDKIDF EGIKPDRRAI FPAGLAILEA IFDALELQRM DHCEGALREG
VLYDLLGRHH HEDVRERTLT SLMERYHVDL EQAARVERKA LHAFDQVAVD WELDDGIWRE
LLGWAAKVHE VGLDIAHYHY HKHGAYLIEH SDLAGFSRED QQMLALLVRG HRRNIPKDKF
AEFGDDGDKL IRLCVLLRFA ILFHHIRGTQ AMPQVALHAN GDNLDVEFPE NWLDENQLTQ
ADFGLEAEWL TRVGIVLTVH