Gene Pfl01_5449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5449 
Symbol 
ID3714065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6115113 
End bp6115769 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content53% 
IMG OID 
ProductTonB-like 
Protein accessionYP_351177 
Protein GI77461670 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0228377 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGTTGC CGGTTCGGCA TTTCAGCTTG AAGGGGTGGG TCATGCGGTG GTTTTTTGCT 
CTGGTTCTAC TGGCGTTGAT GGGGATTGCA GGAGCAGCAG AGGTGGTGTT GATCCCCGAT
AATAATCCGG GTCCGGTTTA TCCTCGCGAA CTTGCCAAGG CGGGGGTCAT GGGTGAGGTT
CGTGTGCGTT TCACCGCCAA TGCAGATGGC TCGGTGAGTG ACATCGCTAT TCTGGAAAGT
GAGCATCCTG ATTTTTCCGC AGCGGTCACT GATGCCCTGC GGCAATGGCG ATTCAGGTCA
TGGACGGTAG AGGCGGGCAA ACCCGCAGAA ATGGAAGTCA TCGCCCCCAT GTTTTTTCGA
CTGGATATTG ACTCTCCGAT TCATGCAAAC CAATGGCTGC GCAGAGTGCG ATGTGTCGAT
CTCCACCAAT ACGCCATTCG CCGTCCGGTT TCTTCCTGGG TTCACTTGCC GGTCTTTCAT
TACACGCGGG CGTATTTATC CAGCGTGGTT TATACAAGTC AGCTTTCGAA CGAACGTCGA
CTGGGCTTGA TTGCCAAGCT CAATGAGCGT GCCCGCTACA TTATTGATCG CTGTGGAAAA
AGCCCGAATA GTCGGTATGT GAATTTGTTG CCGGAGGATA TTCGCGAATT GCTTTAG
 
Protein sequence
MLLPVRHFSL KGWVMRWFFA LVLLALMGIA GAAEVVLIPD NNPGPVYPRE LAKAGVMGEV 
RVRFTANADG SVSDIAILES EHPDFSAAVT DALRQWRFRS WTVEAGKPAE MEVIAPMFFR
LDIDSPIHAN QWLRRVRCVD LHQYAIRRPV SSWVHLPVFH YTRAYLSSVV YTSQLSNERR
LGLIAKLNER ARYIIDRCGK SPNSRYVNLL PEDIRELL