Gene Pfl01_5431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5431 
Symbol 
ID3714335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6098841 
End bp6100064 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content66% 
IMG OID 
Product2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 
Protein accessionYP_351159 
Protein GI77461652 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.509963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0291121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATGC GCGCGGATGT GCTGATTGTC GGAGCCGGAA TGGTCGGCAG TGCCCTGGCG 
CTGGCGTTGC AGGGCAGCGG GCTGGAAGTC CTGCTGCTCG ACGGCAGCCC GTTGAGCGTC
AAACCCTTCA AGGGCGACGC ACCGTTCGAG CCACGGGTGA GCGCACTGTC GGCGGCCAGC
CAGCGAATCC TCGATCGCCT CGGCGTGTGG GACGGCATCG TCAATCGACG CACCAGCCCT
TACACCGACA TGCACGTCTG GGACGGCAGC GGCACCGGGC AGATCCACTT CTCGGCCAGC
AGTGTGCACG CCGATGTGCT TGGGCATATT GTTGAAAACC GCGTGGTCCA GGATGCCTTG
CTCGAGCGTC TGCACGATTG CGACCTGGGC CTGCTGGCCA ACGCGCGGCT GGAGCAGATG
CGCCGTTCCG GTGACGACTG GCTGCTGACC CTGGCCGATG GCCGCACCTT GCGCGCGCCG
CTGGTGATCG CGGCGGACGG CGCCAACTCT GCCGTGCGCC GTCTGACCGG TGTCGCCACT
CGCGAGTGGG ATTACCTGCA TCACGCCATC GTCACCAGCG TGTGCAGCAG CAAACCGCAC
CGCATGACCG CGTGGCAGCG TTTCACCGAT CACGGGCCTC TGGCCTTTTT GCCGCTGGAG
CGTGACGGTC AGCAGGACTG GTGCTCGATC GTCTGGTCTA CCACGCCGAG CGAAGCCGAA
CGGCTGATGG CGCTGGAGGA AGCGGACTTC TGCCGTGAGC TGGAGCGCGC GTTCGAAGGT
AGCCTCGGCG AGGTCATCAG CGCCGACCCG CGCCTGTGTG TGCCGCTGCG TCAGCGTCAC
GCCAAGCGCT ACGTGGCCGA AGGCCTGGCG CTGATCGGTG ATGCCGCACA CACCATTCAC
CCATTGGCGG GGCAGGGTGT GAACCTGGGT TTCCTCGACG CCGCGGTGCT GGCCGAAGTG
TTGTTGCAGG CCAACGAACG CGGCGAACGC CTAGCTGACG TGAAAGTCCT GAGCCGCTAC
GAGCGTCGGC GTATGCCGCA CAACCTGGCA CTGATGGCGG CGATGGAAGG CTTCGAGCGG
TTGTTCCAGG CTGACCCGCT GCCGCTGCGC TGGCTGCGCA ACACCGGGCT GAAAATCGTC
GAGCAGATGC CCGAGGCCAA GGCGCTGTTC GTGCGTGAAG CATTGGGGCT GACCGGGGAC
TTGCCGGCCC TGGCCAAGGC CTGA
 
Protein sequence
MEMRADVLIV GAGMVGSALA LALQGSGLEV LLLDGSPLSV KPFKGDAPFE PRVSALSAAS 
QRILDRLGVW DGIVNRRTSP YTDMHVWDGS GTGQIHFSAS SVHADVLGHI VENRVVQDAL
LERLHDCDLG LLANARLEQM RRSGDDWLLT LADGRTLRAP LVIAADGANS AVRRLTGVAT
REWDYLHHAI VTSVCSSKPH RMTAWQRFTD HGPLAFLPLE RDGQQDWCSI VWSTTPSEAE
RLMALEEADF CRELERAFEG SLGEVISADP RLCVPLRQRH AKRYVAEGLA LIGDAAHTIH
PLAGQGVNLG FLDAAVLAEV LLQANERGER LADVKVLSRY ERRRMPHNLA LMAAMEGFER
LFQADPLPLR WLRNTGLKIV EQMPEAKALF VREALGLTGD LPALAKA