| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5413 |
|---|
| Symbol | |
|---|
| ID | 3714435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 6077094 |
|---|
| End bp | 6078242 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | alkanesulfonate monooxygenase |
|---|
| Protein accession | YP_351141 |
|---|
| Protein GI | 77461634 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.592589 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.0021223 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTCA ACATCTTCTG GTTCCTGCCG ACCCACGGCG ACGGCCATTA CCTTGGCACC
GCCGAAGGCG CCCGCGCCGT CGACCATGGC TATCTGCAAC AGGTCGCGCA AGCGGCGGAT
CGACTGGGTT TCGGCGGCGT GCTGATTCCC ACTGGCCGTT CGTGCGAGGA CTCGTGGCTG
GTGGCAGCAT CGCTGATCCC GGTGACCCAG CGTCTGAAAT TCCTTGTCGC CCTGCGCCCC
GGGATCATTT CCCCGACGGT GGCGGCGCGT CAGGCGGCAA CGCTGGATCG TCTGTCCGGC
GGTCGTGCGC TGTTCAACCT GGTGACCGGT GGCGATCCGG AAGAGTTGGC CGGCGACGGT
CTGTTCCTCG ATCACGAAGC GCGCTATCAG GCCTCGGTGG AATTCACCCG GATCTGGCGC
CGCGTGCTGG AAGGTGAAAC CGTGGATTAC GATGGCGAGC ACATCAGCGT GAAGGGCGCC
AAATTGCTCT ATCCGCCGAT CCAGCAACCG CGTCCGCCGC TGTATTTCGG TGGCTCGTCG
GAAGCGGCGC AGGATCTGGC CGCCGAACAA GTGGAAATGG TCCTGACCTG GGGCGAGCCG
CCCGCAGCCG TGGCCGAGAA GATTGAACAG GTGCGCGCCA AAGCCGCCAA GCTCGGCCGC
ACCGTGCGCT TCGGCATTCG CCTGCATGTG ATCGTGCGGG AAACCAACGC TGAAGCCTGG
CAAGCGGCAG ATCGCCTGAT CTCGCATCTG GACGACGACA CCATCAAACG TGCCCAGGCT
TCGCTGGCGC GGTTCGATTC GGTCGGCCAG CAACGCATGG CCGCGTTGCA CGGTGGCAGC
CGCGATAACC TCGAAGTCAG CCCGAACCTG TGGGCCGGCG TCGGTCTGGT ACGCGGGGGG
GCCGGGACGG CGCTGGTCGG CGACGGCCCG ACCGTGGCGG CGCGGGTGAA GGAGTACGCG
GATCTGGGCA TCGATACCTT CATTTTCTCC GGTTATCCAC ACCTCGAAGA ATCGTATCGG
GTGGCTGAAC TGCTGTTCCC GCACCTCGAC GTCGAGCGTC CGGAATTGCC AAAAAGCGCC
GGTTACGTCA GCCCGTTCGG CGAGATGGTG GCCAACGACA TTCTTCCCAA AGCCGCGTCC
CAGAGCTGA
|
|---|
| Protein sequence | MSLNIFWFLP THGDGHYLGT AEGARAVDHG YLQQVAQAAD RLGFGGVLIP TGRSCEDSWL
VAASLIPVTQ RLKFLVALRP GIISPTVAAR QAATLDRLSG GRALFNLVTG GDPEELAGDG
LFLDHEARYQ ASVEFTRIWR RVLEGETVDY DGEHISVKGA KLLYPPIQQP RPPLYFGGSS
EAAQDLAAEQ VEMVLTWGEP PAAVAEKIEQ VRAKAAKLGR TVRFGIRLHV IVRETNAEAW
QAADRLISHL DDDTIKRAQA SLARFDSVGQ QRMAALHGGS RDNLEVSPNL WAGVGLVRGG
AGTALVGDGP TVAARVKEYA DLGIDTFIFS GYPHLEESYR VAELLFPHLD VERPELPKSA
GYVSPFGEMV ANDILPKAAS QS
|
|---|
| |