Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5404 |
Symbol | |
ID | 3714758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6066945 |
End bp | 6068072 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | extracellular solute-binding protein |
Protein accession | YP_351132 |
Protein GI | 77461625 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000245963 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | TTGGGCCCAA CTAAATCAGA GGACCTCCAC TTGCCTATTT TTTCTTCTTT GCGCAATGCC CTGCTGGCCG CTGCCGGCCT GACGTTCGCT GTCGGTGCCC AAGCCGCCGG TACTGTGCAT ATTTATAACT GGTCGGATTA CATCGGCGAG ACCACCCTGG CCGATTTCCA GAAAGAAACC GGGATCAAAC CGGTCTACGA CGTGTTCGAT TCCAACGAAA CCCTGGAAGG CAAACTGCTC GCCGGGCGTA CCGGCTACGA CGTGGTCGTG CCGTCGAACC ACTTCCTCGG CAAGCAGATC AAGGCGGGCG CGTTCCAGAA GCTCGACAAG GCGCAACTGC CGAACTATTC CAACCTCGAT CCGGTGCTGC TCAAGCGCCT GGAACAGAAC GATCCGGGCA ACCTGTACGC CGTACCGTAC CTGTGGGGCA CCAACGGCAT CGGCTACAAC GTCGATAAAG TGAAGGCCGT GCTCGGCGTC GACAAGATCG ACTCCTGGAG CGTGCTTTTC GAGCCGGAGA ACATCAAGAA GCTGCACAGC TGCGGCGTGG CGTTCCTCGA TTCGGCCGAT GAAATGATGC CGACCGTGCT CAACTACATG GGCCTGAACG CCAACAGCAC CAATCCCAAG GATTACGAGA AGGCCACGGC CAAACTGCTG GCGGTGCGTC CGTACGTGAC CTACTTCCAC TCCTCGAAAT ACATCGGCGA TCTGGCCAAC GGCGACATCT GCGTGGCCAT CGGTTTCTCC GGCGACATCT TCCAGGCCAA GAATCGCGCC GAAGAAGCCA AGAAGGGCGT GAACATCGCC TACTCGATCC CGAAAGAGGG CGGCGCGCTG TGGTTCGACA TGCTGGCGAT TCCGAAGGAT TCGGCCAACG TCAAAGAGGC CCATGCCTTC ATCAACTATT TGCTGAAACC TGAGGTGATC GCCCAGGTCA GTGATTACGT CGGTTACGCC AACCCCAATC CGGGTTCGGA CAAGCTGATG GAGCAGTCCA TCCGCACCGA CGAGTCGGTT TATCCACCGC AGGCCGTGCT CGACAAGACC TACGTGTCGA TCGAGTTGCC GCCGAACATT CAGCGTTTGA TGACCCGCAG CTGGACCAAG GTCAAGTCGG GTAAATAG
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Protein sequence | MGPTKSEDLH LPIFSSLRNA LLAAAGLTFA VGAQAAGTVH IYNWSDYIGE TTLADFQKET GIKPVYDVFD SNETLEGKLL AGRTGYDVVV PSNHFLGKQI KAGAFQKLDK AQLPNYSNLD PVLLKRLEQN DPGNLYAVPY LWGTNGIGYN VDKVKAVLGV DKIDSWSVLF EPENIKKLHS CGVAFLDSAD EMMPTVLNYM GLNANSTNPK DYEKATAKLL AVRPYVTYFH SSKYIGDLAN GDICVAIGFS GDIFQAKNRA EEAKKGVNIA YSIPKEGGAL WFDMLAIPKD SANVKEAHAF INYLLKPEVI AQVSDYVGYA NPNPGSDKLM EQSIRTDESV YPPQAVLDKT YVSIELPPNI QRLMTRSWTK VKSGK
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