Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5371 |
Symbol | |
ID | 3714784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6032782 |
End bp | 6035091 |
Gene Length | 2310 bp |
Protein Length | 769 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase |
Protein accession | YP_351099 |
Protein GI | 77461592 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGATT CCCTGCACAC CCACAAGCCC GGCGACGGGC ACGATCACAG TCACACACTG CAGCCTGTGC ATAAACATGC CTACGCCGGC GATTCCTGTT GCGGGTCGAA AACCGTTACG CCTGCGCCGG TTCATTCGAG TGAAGACTCG TGCTGTTCGT CGAAAGTCGC CGCACCTTCG CTTGTTCAAC TGAGTGAGGC AAAAAGCGCC GACGCCCGGT TGAGCAGCTT CCGCATCGAA GCGATGGACT GCCCGACCGA ACAGACGCTG ATCCAGAACA AGCTCGGCAA ACTGGCCGGG ATCCAGCAGC TGGAATTCAA CCTGATCAAT CGCGTGCTCG GCGTGACCCA CAATCTGCCG GACACCGCGC CAATCATCGA CGCGATCAAA TCCCTCGGCA TGCAGGCCGA GCCGCTGGAG GCGGGCGTTG AATCGACGGT TGCAGCGCCG GTGAAAAAAC ATTGGTGGCC ACTGGCGCTG TCCGGCGTCG GTGCGCTCGC TGCCGAAGTG ATCCACTTCA CCAGCGCCGC GCCGACCTGG GTGGTGGCGA TCATCGCGCT GACTTCCATC CTCAGCGGCG GCCTCACCAC CTACAAGAAG GGCTGGATCG CCCTGAAGAA CCGCAACCTC AACATCAACG CCCTGATGAG CATCGCCGTG ACCGGCGCCG TATTGATCGG CCAATGGCCG GAAGCAGCGA TGGTGATGTT CCTGTTCACC GTGGCCGAGC TGATCGAAGC GCGCTCGCTG GATCGCGCAC GCAATGCCAT CAGCGGCCTG ATGCAGATGA CGCCGGAGCA GGCAACGGTG TTGCAGGCGG ATGGCAACTG GGTCGAGCTC GACGTCAAAA GCATCGATCT CGGCGCCCGC GTGCGGGTGA AACCCGGTGA ACGCATCGCG CTGGACGGTG AAGTCGTCAG CGGCAGTTCG ACCATCGATC AGGCGCCGAT CACCGGTGAA AGCCTGCCGG TGGAGAAAAC CGTCGGCGAC AAAGTGTTCG CCGGCACCAT CAACCAGGCC GGTTCGCTGG AATATGCGGT GACTGCAGCG GCGAACAATT CCACCCTGGC GCGAATCATC CACGCCGTGG AGCAGGCGCA AGGCGCGCGG GCGCCGACCC AGCGTTTCGT CGATCAGTTC TCGAAAATCT ACACCCCGGT GGTCTTCGTC CTGGCCCTGG CCGTGGCGAT CATCCCGCCG CTGTTCATGG CCGCCGCGTG GTTCGACTGG ATTTATCGCG CGCTGGTGCT GCTGGTGGTC GCTTGCCCGT GTGCGCTGGT GATTTCCACC CCGGTGACCA TCGTCAGCGG CCTTGCGGCA GCAGCGCGCA AAGGCATTCT GGTCAAGGGC GGCGTGTACC TGGAGGGCGG TTTCAAGCTC GACTATCTGG CCCTCGACAA GACCGGCACC ATCACCCACG GCAAACCGGT ACAGACCGAT TACCTGTCCC TCGACCCGAC CGCCGACGCC ACGGCCCCGG CCATTGCCGC CGCGCTGGCC GGTCGCTCCG ATCACCCCGT ATCGCTGGCC ATCGCCAACG CGGCTGTGGA TAAAGGTTTC GCGGCTCTGC TTGTGGATAA CTTCGAAGCG CTGGCTGGCC GTGGGGTAAA AGGCGAGGTC AACGGTCAGG TCTACCACTT GGGCAACCAC CGACTGGTGG AAGAACTGGG CCTGTGTTCG CCGCAACTGG AAGAAAAGCT GTTCGCACTG GAGAAACAAG GCAAGTCCGT GGTGTTGCTG CTCGACAGCT CCGGCCCGCT GGCGCTGTTC GCCGTGGCCG ACACGGTCAA GGAAACCAGC CGCGAAGCGA TCCGCCAACT GCACGATCTG GGCGTGAAAA CCCTGATGCT GACCGGCGAC AACGTCCACA CCGCGCAAGC GATTGCGGCG CAGGTCGGGA TCGATCAGGC CAAGGGCGAC TTGCTGCCGA CCGACAAACT GCAAGCCATC GAAGACCTTT ACGCCAAAGG GCGCCGGGTC GGCATGGTCG GCGACGGCAT CAACGACGCA CCGGCACTGG CTCGGGCCGA GATCGGTTTT GCGATGGCGG CGGCCGGCAC CGATACGGCG ATCGAAACCG CCGATGTCGC CCTGATGGAC GACGATCTGC GCAAGATACC GGCCTTCATC AGCCTGTCGC GTCATACCGC CGCTATCCTG AAACAGAACA TCGCACTGGC GCTGGTGATC AAAGCGATCT TTCTTGGGGT AACCTTCGCC GGGCTCGCCA CCATGTGGAT GGCGGTGTTT GCCGACATGG GCGTGAGCCT GCTGGTGGTG TTCAACGGTT TGCGCCTGCT GCGCAAATAG
|
Protein sequence | MSDSLHTHKP GDGHDHSHTL QPVHKHAYAG DSCCGSKTVT PAPVHSSEDS CCSSKVAAPS LVQLSEAKSA DARLSSFRIE AMDCPTEQTL IQNKLGKLAG IQQLEFNLIN RVLGVTHNLP DTAPIIDAIK SLGMQAEPLE AGVESTVAAP VKKHWWPLAL SGVGALAAEV IHFTSAAPTW VVAIIALTSI LSGGLTTYKK GWIALKNRNL NINALMSIAV TGAVLIGQWP EAAMVMFLFT VAELIEARSL DRARNAISGL MQMTPEQATV LQADGNWVEL DVKSIDLGAR VRVKPGERIA LDGEVVSGSS TIDQAPITGE SLPVEKTVGD KVFAGTINQA GSLEYAVTAA ANNSTLARII HAVEQAQGAR APTQRFVDQF SKIYTPVVFV LALAVAIIPP LFMAAAWFDW IYRALVLLVV ACPCALVIST PVTIVSGLAA AARKGILVKG GVYLEGGFKL DYLALDKTGT ITHGKPVQTD YLSLDPTADA TAPAIAAALA GRSDHPVSLA IANAAVDKGF AALLVDNFEA LAGRGVKGEV NGQVYHLGNH RLVEELGLCS PQLEEKLFAL EKQGKSVVLL LDSSGPLALF AVADTVKETS REAIRQLHDL GVKTLMLTGD NVHTAQAIAA QVGIDQAKGD LLPTDKLQAI EDLYAKGRRV GMVGDGINDA PALARAEIGF AMAAAGTDTA IETADVALMD DDLRKIPAFI SLSRHTAAIL KQNIALALVI KAIFLGVTFA GLATMWMAVF ADMGVSLLVV FNGLRLLRK
|
| |