Gene Pfl01_5341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5341 
Symbol 
ID3714910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6001348 
End bp6002346 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content64% 
IMG OID 
ProductAlpha/beta hydrolase fold 
Protein accessionYP_351069 
Protein GI77461562 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCCTT CGTCAAAAAC GTTCATCCCC GCCTTCGGCC TCGGCAATCC GCACCTGCAA 
ACCTTGTGGG GGCCGCTGTG GCGTAAAACC GTGCACCTTG ATCGCCAGCG CGAACGGCTG
TGGCTGGACG ACGGCGACTT TCTGGATCTG GACTGGTATG GCCCGCACAG TGCCGAGGCG
CCATTGGTGC TGGTATTGCA CGGGCTGACC GGTTCTTCCA ATTCGCCTTA CGTGGCCGGA
ATCCAGGCAG CGCTCGCCGC GCAAGGCTGG GCCAGTGTTG CGCTGAACTG GCGCGGCTGC
TCCGGCGAGC CGAACCTGTT GCCGCGCAGC TACCATTCCG GCGCCAGCGA AGACCTCGCC
GAAACCCTCC GCCACCTGAA GGCCAAGCGG CCACTGGCGC CGTTGTATGC GGTCGGCTAT
TCCCTCGGCG GCAACGTGCT GCTCAAGCAT CTGGGGGAAA CCGGCAGCGC CAGCGGCGTG
CTCGGTGCGG TGGCGGTGTC GGTGCCGTTT CGCCTGGATC AATGTGCCGA CCGTATCGGC
CAGGGTTTCT CGAAGGTCTA TCAGGCGCAC TTCATGCGCG AGATGGTCGC CTACATCAAG
AACAAGCAGC GCCAGTTCCA GCACGACGGC CGCGAGGATG GTCTCGCTGC ACTGGCGGCC
CTCGGCTCGC TGGAAAACAT GCGCACCTTC TGGGATTTCG ATGGCCGGGT GACCGCGCCT
CTGCACGGTT TCGCCGATGC CGAGGATTAC TATCGCCGCG CGTCGAGCCG TTACTTTCTC
GGCGAGATTC GCACGCCGAC CCTGATCATT CAGGCGGCCG ACGACCCGTT CGTGTTCCCC
CACAGCCTGC CTTCGGCCAA TGAGTTGTCG GCCACGACCC AGTTCGAATT GCAGAATAAG
GGCGGGCATG TCGGCTTCGT CGACGGCACA CTCCGCCAGC CGGGTTATTA CCTGGAGCGA
CGGATTCCAC AGTGGCTGGC CGACGCGGGG CGCGAGTGA
 
Protein sequence
MSPSSKTFIP AFGLGNPHLQ TLWGPLWRKT VHLDRQRERL WLDDGDFLDL DWYGPHSAEA 
PLVLVLHGLT GSSNSPYVAG IQAALAAQGW ASVALNWRGC SGEPNLLPRS YHSGASEDLA
ETLRHLKAKR PLAPLYAVGY SLGGNVLLKH LGETGSASGV LGAVAVSVPF RLDQCADRIG
QGFSKVYQAH FMREMVAYIK NKQRQFQHDG REDGLAALAA LGSLENMRTF WDFDGRVTAP
LHGFADAEDY YRRASSRYFL GEIRTPTLII QAADDPFVFP HSLPSANELS ATTQFELQNK
GGHVGFVDGT LRQPGYYLER RIPQWLADAG RE