| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5318 |
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| Symbol | |
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| ID | 3715022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 5982168 |
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| End bp | 5983202 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | pilus retraction protein PilT |
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| Protein accession | YP_351046 |
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| Protein GI | 77461539 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.384971 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATCA CTGAACTGCT GGCCTTCAGC GCCAAACAGG GCGCTTCCGA CCTGCACCTG
TCGGCCGGTC TGCCGCCGAT GATCCGCGTG GATGGCGATG TGCGGCGGAT CAATCTGCCG
GCGCTGGATC ACAAACAGGT GCACGAGCTG ATCTACGACA TCATGAACGA CACCCAGCGG
GTGGACTTCG AGAAACATCT GGAAACCGAC TTTTCCTTCG AAGTCCCCGG CGTGGCGCGC
TTCCGGGTCA ATGCCTTCAA CCAGAACCGT GGCGCTGGCG CGGTGTTCCG GACCATTCCG
TCGAAAGTGC TGAGCATGGA AGACCTCGCC ATGGGCGACG TCTTTCGCAA GATCACCGAT
GCGCCACGCG GGCTGGTGCT GGTGACCGGG CCGACCGGCT CCGGCAAGTC AACGACCCTG
GCGGCGATGA TCGATTACCT CAACACCCAT CGCCATCACC ACATCCTGAC CATTGAAGAT
CCGATCGAAT TTGTCCACGA ATCGCGCAAA TGCCTGATCA ATCAGCGCGA AGTCCATCGC
GATACCCGCA GTTTCGCCAC CGCATTGCGT TCGGCATTGC GCGAAGACCC GGACGTGATC
CTGGTGGGCG AGATGCGCGA TCTGGAAACC ATTCGCCTGG CGCTGACGGC GGCCGAGACC
GGGCACCTGG TGTTCGGCAC CTTGCACACT ACTTCGGCAG CCAAGACCAT CGACCGTGTC
GTGGACGTGT TCCCCGGGGA CGAAAAATCC ATGGTGCGCT CGATGCTGTC GGAGTCGTTG
CTGGCGGTGG TGTCGCAGAC GCTGATCAAG AAGATCGGCG GTGGTCGGGT GGCGGCGCAC
GAGATCATGC TGGGCACTTC GGCGATCCGT AACCTGATCC GCGAGGACAA GGTGGCGCAG
ATGTATTCGG CGATACAGAC CGGCGGCTCG CTGGGGATGC AGACACTCGA CATGTGCCTG
AAGGATCTGG TGACCAAAGG CTTGATCAGC CGCGAACATG CGCGGGAGAA GGCGCGCACG
CCGGATAACT TTTAG
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| Protein sequence | MDITELLAFS AKQGASDLHL SAGLPPMIRV DGDVRRINLP ALDHKQVHEL IYDIMNDTQR
VDFEKHLETD FSFEVPGVAR FRVNAFNQNR GAGAVFRTIP SKVLSMEDLA MGDVFRKITD
APRGLVLVTG PTGSGKSTTL AAMIDYLNTH RHHHILTIED PIEFVHESRK CLINQREVHR
DTRSFATALR SALREDPDVI LVGEMRDLET IRLALTAAET GHLVFGTLHT TSAAKTIDRV
VDVFPGDEKS MVRSMLSESL LAVVSQTLIK KIGGGRVAAH EIMLGTSAIR NLIREDKVAQ
MYSAIQTGGS LGMQTLDMCL KDLVTKGLIS REHAREKART PDNF
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