Gene Pfl01_5317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5317 
Symbol 
ID3715021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5981505 
End bp5982122 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content57% 
IMG OID 
ProductNLP/P60 
Protein accessionYP_351045 
Protein GI77461538 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.378858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCCAT TTTTCAAGAC ATGGCTAACC ATTTGCCTAT TAATGCCACT GGCCGCCCAC 
GCCACCAATC GTGAGCAACG TCTTCCCAAC GTTAACGGTT TCACCCCTAA ATCCCATGCC
TCTGCTCCTT CGAACAAAGG CAAACAGGTC AAACACACCA CGCTGAGCAG CAACGGCCGC
AGCAAGCTGG TGCCACCGAT GGCGACCAAG GAAAGCAGTA ACGTCCTGAG TCGCGCGGTA
AACGTCCTCG GTACGCCATA CCGCTGGGGC GGCAGCAGCC CGAGTAAAGG CTTCGACTGC
AGCGGTCTGG TGAAGTATGC GTTCAACGAC GCCACGTTCG ACCTGCCACG CACCTCGAAC
GCCATGGCCA GCGGTCACGG CGAGAAAGTC GAACGCAAGG ACCTGAAACC GGGCGACCTG
ATTTTTTTCA ACATCAAGAG CCGTCGGGTC AATCACGTTG CCATCTACCT GGGCAACGAC
CGTTTCATCC ATGCGCCACG GCGCGGCAAA GCGGTGAGCA TCGACACACT GAACAAGCCG
TACTGGGAAA AGCATTACGT GGTAGCCAAA CGCGTATTGC CGAAAGAACA GGGGCAGATG
CGCGTCGTTC AGCGCTGA
 
Protein sequence
MRPFFKTWLT ICLLMPLAAH ATNREQRLPN VNGFTPKSHA SAPSNKGKQV KHTTLSSNGR 
SKLVPPMATK ESSNVLSRAV NVLGTPYRWG GSSPSKGFDC SGLVKYAFND ATFDLPRTSN
AMASGHGEKV ERKDLKPGDL IFFNIKSRRV NHVAIYLGND RFIHAPRRGK AVSIDTLNKP
YWEKHYVVAK RVLPKEQGQM RVVQR