Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5287 |
Symbol | |
ID | 3715355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5949854 |
End bp | 5951260 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | adenosylmethionine--8-amino-7-oxononanoate transaminase |
Protein accession | YP_351015 |
Protein GI | 77461508 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.490599 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCCTGA ACAACCAGTG GATGCAACGC GATCTCGCGG TGCTGTGGCA TCCCTGCACC CAGATGAAAG ACCACGAACA GCTGCCGCTG ATCCCGATCA AGCGCGGTGA AGGCGTCTGG CTGGAAGACT TCGAAGGCAA GCGTTATCTG GATGCGGTCA GCTCCTGGTG GGTCAACGTG TTCGGCCACG CCAACCCGCG CATCAACCAA CGCATCAAGG ATCAGGTCGA TCAGCTGGAA CACGTGATTC TGGCCGGTTT CAGCCATCAG CCGGTGATCG AACTGTCCGA GCGTCTGGTG AAGATGACGC CGGAAGGCCT GAACCGGGTG TTCTACGCCG ATAACGGTTC GTCCTGCATC GAAGTCGCGC TGAAAATGAG CTTTCACTAC TGGCTCAACC GCGGCCAGCC GAACAAGAAG CGCTTCGTCA CCCTGACCAA CAGCTACCAC GGCGAAACCA TGGCGGCGAT GGCGGTCGGT GACGTGCCAT TGTTCACCGA AACCTACAAA GCCCTGCTGA TGGACACCAT CAAGGTGCCG AGCCCGGATT GCTACCTGCG CCCGCAGGGC ATGAGCTGGG AAGAGCATTC GCGCAACATG TTCGCGGCCA TGGAACAGAC GCTGGCGGAA AATCATGACA GCGTCGCGGC CGTGATCGTC GAGCCACTGA TCCAGGGCGC CGGCGGCATG CGCATGTACC ACCCGGTCTA TCTCAAGCTG CTGCGCGAAG CCTGCGACCG TTACGGTGTG CACCTGATCC ACGACGAAAT CGCCGTCGGC TTCGGCCGCA CCGGAACGAT GTTCGCCTGC GAACAGGCCG GCATCCGCCC GGACTTCCTG TGCCTGTCGA AAGCCCTGAC CGGCGGTTAT CTGCCGTTGG CCGCGTGCCT GACCACCGAC GAGGTGTACA GCGCGTTCTA CGACGATTAC CCGACCCTGC GTGCGTTCCT GCATTCGCAC AGCTACACCG GCAACCCGCT GGCGTGTGCG GCGGCGTTGG CGACCCTGGA TATTTTCGAA CAGGACAACG TGATCGAGAA CAACCGGGCG CTGGCTCAAC GCATGGCCTC GGCGACGGCG CATCTGGTGG ATCATGCGAA TGTTTCGGAA GTCCGTCAGA CCGGCATGGT GCTGGCGATC GAGATGGTCA AGGACAAAGC CACGAAAGAG GCCTATCCGT GGCAGGAACG TCGCGGGTTG AAGGTGTTCC AGCATGCGCT GGAGCGCGGC GCGTTGCTGC GCCCGTTGGG CAGCGTGGTG TATTTCCTGC CGCCGTACGT GATCACCCCG GAGCAGATCG ACTTCCTCGC CGAAGTCGCC AGCGAAGGCA TCGACATTGC TACCCGCGAC AGCGTCAGCG TGGCGGTGCC GAAAGATTTC CATCCCGGGT TCCGCGATCC GGGCTAA
|
Protein sequence | MGLNNQWMQR DLAVLWHPCT QMKDHEQLPL IPIKRGEGVW LEDFEGKRYL DAVSSWWVNV FGHANPRINQ RIKDQVDQLE HVILAGFSHQ PVIELSERLV KMTPEGLNRV FYADNGSSCI EVALKMSFHY WLNRGQPNKK RFVTLTNSYH GETMAAMAVG DVPLFTETYK ALLMDTIKVP SPDCYLRPQG MSWEEHSRNM FAAMEQTLAE NHDSVAAVIV EPLIQGAGGM RMYHPVYLKL LREACDRYGV HLIHDEIAVG FGRTGTMFAC EQAGIRPDFL CLSKALTGGY LPLAACLTTD EVYSAFYDDY PTLRAFLHSH SYTGNPLACA AALATLDIFE QDNVIENNRA LAQRMASATA HLVDHANVSE VRQTGMVLAI EMVKDKATKE AYPWQERRGL KVFQHALERG ALLRPLGSVV YFLPPYVITP EQIDFLAEVA SEGIDIATRD SVSVAVPKDF HPGFRDPG
|
| |