Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5283 |
Symbol | |
ID | 3715351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5944390 |
End bp | 5946258 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | DEAD/DEAH box helicase-like |
Protein accession | YP_351011 |
Protein GI | 77461504 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTTTG CTTCCCTCGG TCTCTCCGAG GCTTTGGTCC GCGCTATCGA AGACGCGGGC TATACCGAGC CTACTCCGGT GCAACAGCGG GCCATTCCCG CCGTGTTGCA AGGTCGCGAC CTGATGGTTG CGGCACAGAC AGGTACCGGT AAAACCGGCG GTTTCGCCCT TCCGATCCTG GAGCGGCTGT TCCCCAACGG TCACCCGGAC AAATCCCAGC GTCACGGCCC GCGCCAACCG CGCGTGCTGG TCTTGACCCC GACCCGCGAA CTCGCGGCGC AGGTTCACGA CAGTTTCAAG ATCTACGCCC GCGACCTGAA ATTCGTCAGC GCGTGCATCT TCGGCGGCGT CGGCATGAAT CCGCAGGTTC AGGCCATGTC CCGTGGCGTT GACGTGCTGG TGGCGTGCCC CGGTCGTCTG CTCGACCTGT GCGGCCAGGG CAGTGTCGAT CTGTCCCACG TCGAAATTCT CGTGCTCGAC GAAGCCGACC GCATGCTCGA CATGGGCTTC GTCCACGACG TGAAGAAAGT CCTCGCCCGT CTGCCGGCCA AGCGCCAGAA CCTGCTGTTC TCGGCGACCT TCTCCAAAGA CATCACGGAT CTTGCCGGCA AACTGCTGCA CAACCCGGAA CGCATCGAAG TGACGCCGCC GAACACCACG GTCGAGCGCA TCGAACAACG CGTCTTCCGT CTGCCGGCCA GCCACAAGCG TGCACTGCTG GCCCACCTGA TCACCGCTGG CGCGTGGGAA CAGGTGCTGG TGTTCACCCG CACCAAGCAC GGCGCCAACC GTCTGGCCGA GTACCTGGAC AAACACGGCC TGCCGGCTGT GGCGATCCAC GGCAACAAGA GCCAGAACGC CCGCACCAAA GCCCTGGCCG ACTTCAAGGC CGGTGAAGTG CGCATTCTGG TTGCCACCGA CATCGCGGCA CGCGGTCTGG ACATCGACCA GTTGCCACAC GTGGTCAACT TCGAACTGCC GAACGTCGAT GAAGACTACG TCCACCGCAT CGGCCGTACC GGCCGGGCCG GTCGTTCGGG CGAGGCGATC TCGCTGGTCG CACCGGACGA AGAAAAACTG CTGAAAAGCA TCGAGCGCAT GACCAAGCAG AAAATCGCCG ACGGCGACCT GATGGGCTTC GATGCCAGTA CCATCGAGGC CGAGAAGCCT GAAGTTCGCG AGCGTCCGGA CATGCGCAAC CCGCGCAATG CCCGCGGCCC ACGCGGTGAC GGCCCGAATG GCGGCGGCGG TGGCGGCGGT CGTAAAGACA AAGGCAAAGA CAAGGGCAAG GAAAAACCGG CCGGCGAACG TGGCGAGCGT CCAGCCCGTC AACAGAAGCC GCGCGAAGGC ACCCCGGCCC GCGAACAACG CCAGCCAAGC CAGCCGCCAC GCGCCGCTGC TGATCGCGCT CCGGACGAGT TCCTCGACGA CGATATCGAT AACTTCGGTA ACCGCGTCGA CTACGTGCCG AAGCAGGCTC CGACCGGTGG TCGCAACCGT CGTCCAGGCG CTCCGGCGCA AGGCGCAGGT TCAGGCGCAC CCCGCGGCGG TCAGTCGCAA GGTCGCCAGA ACGGCCCGCG TAACAGCAAC GGTTCGAGCA CCGGCACGCC GCCAGGCAAG CGCAGCGGCC CACGCAACGG TGCACCGCGT GACGGCCAGG GTCGTCGCGA TGAAAACTCG CGCAACCGCC GCCCGGCCCG TGATGATCAG CAACGCGCTG AACCGGCCGT GCAGAACCCG CGCAGCAGCG GGCCGAAGAT CATGCACAAG GAATCGAAAG CCGACCGCTT CCCGACCCCT GAGCAGCTGG ATCAACTGCC AAGCCGCCCA CGCGGTGAAA AACCGGCCTT GCTGACCCGC AATCGCTGA
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Protein sequence | MSFASLGLSE ALVRAIEDAG YTEPTPVQQR AIPAVLQGRD LMVAAQTGTG KTGGFALPIL ERLFPNGHPD KSQRHGPRQP RVLVLTPTRE LAAQVHDSFK IYARDLKFVS ACIFGGVGMN PQVQAMSRGV DVLVACPGRL LDLCGQGSVD LSHVEILVLD EADRMLDMGF VHDVKKVLAR LPAKRQNLLF SATFSKDITD LAGKLLHNPE RIEVTPPNTT VERIEQRVFR LPASHKRALL AHLITAGAWE QVLVFTRTKH GANRLAEYLD KHGLPAVAIH GNKSQNARTK ALADFKAGEV RILVATDIAA RGLDIDQLPH VVNFELPNVD EDYVHRIGRT GRAGRSGEAI SLVAPDEEKL LKSIERMTKQ KIADGDLMGF DASTIEAEKP EVRERPDMRN PRNARGPRGD GPNGGGGGGG RKDKGKDKGK EKPAGERGER PARQQKPREG TPAREQRQPS QPPRAAADRA PDEFLDDDID NFGNRVDYVP KQAPTGGRNR RPGAPAQGAG SGAPRGGQSQ GRQNGPRNSN GSSTGTPPGK RSGPRNGAPR DGQGRRDENS RNRRPARDDQ QRAEPAVQNP RSSGPKIMHK ESKADRFPTP EQLDQLPSRP RGEKPALLTR NR
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