| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5255 |
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| Symbol | |
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| ID | 3715765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 5915751 |
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| End bp | 5917874 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_350983 |
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| Protein GI | 77461476 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.864356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATGCG CGCAACCCCA GCCAGGTGAA GGCAGCTCAG TCCTTTTGAT CGTTGATGAC
TACCCTGAAA ATCTGATCAG CATGCGCGCA TTGCTGCAGC GCCAGGACTG GCAGGTGATT
ACCGCGGCTT CCGGTTTCGA AGCCCTCAGT CTGCTGCTCG AACACGACGT TGATCTGGTG
TTGCTGGATG TGCAGATGCC GGGCATGGAC GGCTTCGAAG TCGCGCGCCT GATGCGCGGC
AGTCAGCGCA CGCGCCTGAC CCCGATCATT TTCCTCACCG CCAACGAGCA GTCCCAGGAC
GCCGTGATCA AGGGCTACGC CAGTGGTGCG GTGGATTATC TGTTCAAACC GTTCGATCCG
CAGATTCTCA AGCCCAAAGT CCAGGCGCTG CTCGAACACC AGCGCAATCG CCGGGCCTTG
CAGCGTTTGA GTCAGGATCT GGAATCGGCG CGGGCCTTCA ATGCTTCGGT GCTGGACAAC
GCTGCCGAAG GCATTCTGGT GTTGGGCGAG GATGGCTTGA TTCGCTTCGC CAACCCGGCG
ATTTCCCGGC TGCTCAATGC GCCGGTGAAG GAACTGGAAG GGCAGGAGTT TCTTGATTTC
CTGCAGAAAC CGCACATTCC GCTGTGGGCC GATTCCGAGT TTTATGCCAG TTACAAACGT
GGCGAGACGT TGCGCTTACA CGACGCGTTG CTGCGTACCG CGCCGGGCCA GCAAGTGCCG
GTGGCCTTGT CCTGCGCGCC GCTGCCGAGT GAACAGCACG CGATGGTGGT GACGGTGCTG
GACATGTCGG TGGTGCGCCA TCTGCATCAA CAGCTGGAAT TTCAGGCGGT CACCGACCCG
CTGACCGGGC TGCTCAATCG CCGGGGTTTC TACCAGACTG TGGAAAACCT GCTGCTGCGC
GGCGAGCGCA CGGACAGCAG TTGGGTGTTG ATGTACCTCG ATCTCGACGG CTTCAAAAGG
GTCAACGATT CCCTCGGCCA TGATGCCGGG GACCGGGTGT TGCGCTGGGT CTCCGAACAA
TTGAAAGCCT GCCTGCGGCC ATTCGACATT CTGGCGCGGA TGGGCGGCGA TGAGTTCACC
GCGCTGCTGG ATCTGGAATT CCCCGAACAA GCGGCGAAGA TTGCTGAAAA ACTCATCGAG
CGGGTGTCGA TCTGTCAGCA GATCGAAGGC CTCGATATCG CTCTGGGTGC AAGTATCGGC
ATCGCCACCT ACCCGGATTG CGGCAACAAC CTCGATGGTT TGCTGCGCGC CTCGGACATC
GCCATGTACG AAGCCAAGCG CGCGGGGCGG CAGCAATATC GCTTCTACGA TCATGAAATG
AACGGCCGCG CGCGCTCGCG GTTGATGCTG GAAGAGAGCG TGCGCAACGC CATCGAGAAC
CGCGATTTCA ATCTGGTGTA TCAGCCGCAG GTGGCGATTG GCGACGGCCG GATTCGAGGT
TTCGAGGCGC TGCTGCGCTG GCAGCACCCG AGCGTCGGCG ATGTGCCGCC GGGGCTATTC
CTGCCGTTGC TGGAAGAGGC AACGTTGATC AGCCGGCTCG GCAGCTGGAT CTATCACCGC
AGCGCCGGGC AGCGTAAGGC GTGGGAATCC GAGTTCTCCC AGGATCTGGT GATCGGCGTG
AGCCTGAGCA ACACCCAGTT CGGCCTGCCG AATCTGGTCA CCGAATTGCG CCAGGTGCTG
GAGCGCCATG GATTGCAGCC GCACCAGATG GAAGTGGAAG TGACCGAAGA GGCGCTGACG
ATCAACCCAG ACGAGACCCG CAAACAGCTG AAGCTGCTGC GCAATCTCGG GGTGCGGGTG
GCACTGGACG ATTTCGGTTC CGGGTCCTGC TCGCTGGCGC ATTTGCGCGA TCTGGAACTG
GATACCCTCA AACTCGATCG GCACCTGATC GCCCGATTGC CGGACTCGTC TCGCGACGCT
TCGCTGGTGC GCACGGTCAT CGATTTATGC AAGGAATACG GCTTACTGGT GATTGCCGAA
GGCGTGGAAA CCGTCGAGCA ATACCAGTGG CTGCAAGCTC ATGGTTGCGA GTACGTGCAA
GGGTTTCTGG TGGCGCGGCC GTTGGTCGCC GAGGACACCG CACGCTTTAC CGAGCCGTTC
GACTGGAGCG CGTTGGCCGG TTGA
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| Protein sequence | MECAQPQPGE GSSVLLIVDD YPENLISMRA LLQRQDWQVI TAASGFEALS LLLEHDVDLV
LLDVQMPGMD GFEVARLMRG SQRTRLTPII FLTANEQSQD AVIKGYASGA VDYLFKPFDP
QILKPKVQAL LEHQRNRRAL QRLSQDLESA RAFNASVLDN AAEGILVLGE DGLIRFANPA
ISRLLNAPVK ELEGQEFLDF LQKPHIPLWA DSEFYASYKR GETLRLHDAL LRTAPGQQVP
VALSCAPLPS EQHAMVVTVL DMSVVRHLHQ QLEFQAVTDP LTGLLNRRGF YQTVENLLLR
GERTDSSWVL MYLDLDGFKR VNDSLGHDAG DRVLRWVSEQ LKACLRPFDI LARMGGDEFT
ALLDLEFPEQ AAKIAEKLIE RVSICQQIEG LDIALGASIG IATYPDCGNN LDGLLRASDI
AMYEAKRAGR QQYRFYDHEM NGRARSRLML EESVRNAIEN RDFNLVYQPQ VAIGDGRIRG
FEALLRWQHP SVGDVPPGLF LPLLEEATLI SRLGSWIYHR SAGQRKAWES EFSQDLVIGV
SLSNTQFGLP NLVTELRQVL ERHGLQPHQM EVEVTEEALT INPDETRKQL KLLRNLGVRV
ALDDFGSGSC SLAHLRDLEL DTLKLDRHLI ARLPDSSRDA SLVRTVIDLC KEYGLLVIAE
GVETVEQYQW LQAHGCEYVQ GFLVARPLVA EDTARFTEPF DWSALAG
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