| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5249 |
|---|
| Symbol | |
|---|
| ID | 3715759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 5909883 |
|---|
| End bp | 5911061 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | fumarate reductase/succinate dehydrogenase flavoprotein-like |
|---|
| Protein accession | YP_350977 |
|---|
| Protein GI | 77461470 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGCTCTA CCGAAGTCGT GATCATTGGC GCTGGCGCCG CAGGGTTGAT GTGTGCACTG
ACCGCCGCCG GGCGCGGGCG TCAGGTGATG CTGCTCGACC ACGCGAACAA GGCCGGCAAG
AAAATCCTGA TGTCCGGCGG TGGACGCTGC AACTTCACCA ACATGTACAC CGAACCGAGC
AATTTCCTCT CGCAGAACGC GCACTTCTGC AAATCCGCGC TGGCCCGCTA CACCCAGTGG
GATTTCATCG GCATGGTCGC CAAGCATGGC GTGCCGTATC ACGAGAAAAA GCTCGGTCAG
CTGTTCTGCG ATAACAAATC CAGCGACATC CTCGGCATGC TGCTGGACGA GTGCGATCAG
GTCGGCGTCA ACCTGCACCT CGACACCTCG ATCCAGACCA TCGAGAAAGT CGAGGGCGGT
TACCTGCTCG ACACCACCCT CGGCCAGATC CAGTGCCAGT CGCTGGTGAT CGCCACGGGT
GGCCTGTCGA TCCCGACGTT GGGCGCCACC GGTTTCGGTT ATCAGGTCGC CAAACAGTTC
GGCCATGAAC TGCTGCCGAC CCGCGCCGGG CTGGTGCCGT TCACCATCAC CGATCAGCTC
AAGGAGTTGT GCACCGAACT GTCCGGCACC TCGGTGGATT GCCTGGTCAG CTGCAACGAC
CAGAGCTTTC GCGAGAACAT CCTGTTCACT CACCGTGGCC TCAGCGGTCC GGCGGTTCTG
CAGATTTCCT CGTTCTGGGA GCCGGGCGAC ACGGTGGAGA TCAATCTGCT GCCCGATCAC
GACGCCGCAA GCTGGCTGCA ACAGCAAACC GCCGAGCGCC CGAACAGCGA ACTGAAAACC
CTGCTCGGCG AAATCTTCAC CAAGAAAATG GCCAACCTGC TGGCGGACAA CTGGTTCGTC
TCCAAACCGA TGAAGCAGTA CACCCATGCC GAACTGGCGG ACATCGCCGA GAAGCTGGGC
AGCTGGAAAG TCGTGCCGGC CGGCACCGAG GGCTACCGCA CCGCCGAGGT AACGCTGGGT
GGGGTCGACA CCCGCGAAGT GTCGTCCAAG ACCATGGAAT CGCTGAAAAG CCCGGGCCTG
TACTTCGTTG GTGAAGTGCT GGATGTCACC GGGCATTTGG GCGGATTCAA CTTCCAGTGG
GCGTGGGCCT CTGGCTACGC CGCCGCGCAG TACGTCTGA
|
|---|
| Protein sequence | MRSTEVVIIG AGAAGLMCAL TAAGRGRQVM LLDHANKAGK KILMSGGGRC NFTNMYTEPS
NFLSQNAHFC KSALARYTQW DFIGMVAKHG VPYHEKKLGQ LFCDNKSSDI LGMLLDECDQ
VGVNLHLDTS IQTIEKVEGG YLLDTTLGQI QCQSLVIATG GLSIPTLGAT GFGYQVAKQF
GHELLPTRAG LVPFTITDQL KELCTELSGT SVDCLVSCND QSFRENILFT HRGLSGPAVL
QISSFWEPGD TVEINLLPDH DAASWLQQQT AERPNSELKT LLGEIFTKKM ANLLADNWFV
SKPMKQYTHA ELADIAEKLG SWKVVPAGTE GYRTAEVTLG GVDTREVSSK TMESLKSPGL
YFVGEVLDVT GHLGGFNFQW AWASGYAAAQ YV
|
|---|
| |