Gene Pfl01_5181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5181 
Symbol 
ID3716771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5827109 
End bp5827996 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content64% 
IMG OID 
ProductRarD protein 
Protein accessionYP_350909 
Protein GI77461402 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000181331 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.141075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCCG CCAACCCGCG TCGCGGGTAC ATTCTGGGCC TCAGCGCCTA CATCATCTGG 
GGACTGTTCC CGCTCTACTT CAAAGCCATC GCCGAAGTGC CGGCGGTGGA AATCATCATT
CATCGAGTGC TGTGGTCGGC GCTGTTCGGC GCGCTGCTGT TGATGGTGTG GAAGCATCCC
GGCTGGTGGC AGGAACTGCG CGACAACCCG AAACGCCTGG CGATTCTTGC GCTCAGCGGC
ACCTTGATCG CGGCCAACTG GCTGACCTAC GTGTGGTCGG TGAACAACGG CCGGATGCTG
GAAGCGAGCC TCGGTTATTA CATCAACCCG CTGGTGAACG TGCTACTGGG CATGCTGATC
CTTGGCGAAC GCTTGCGCCG CATGCAGTGG CTGGCGGTCG GTCTGGCGGC TATCGGTGTG
GCGCAGCAGG TGTGGCAGGT CGGCAGCCTG CCGTGGGTAT CGCTGGTGCT GGCGCTGACC
TTCGGTTTCT ACGGGCTGAT CCGCAAGCAG GCGCCGATCA AGGCGTTGCC GGGGCTGGTG
GTGGAAACCT GGATGCTGGT GCCGATCGCC CTCGCGTGGC TGCTGTTCAA TCCGACCGCC
ACCAGCGCTC AGGCCGAGTT CTGGACCACC TCCGAAGCCT GGTGGCTGGT GGCAGCCGGT
CCGGTGACGC TGGTGCCGCT GGTGTGCTTC AACGCGGCCG CGCGGCATCT GCCTTACACC
ACCCTCGGCT TCCTGCAATA CCTGGCGCCG ACGCTGGTGC TGCTGCAAGC CGTGCTGCTG
TTCGGCGAGC ACTTGTCGTC CAGCACACTG ATCGCCTTCA TGTTTATCTG GGCCGGTCTG
GCGGTGTACA GCGTCGATGC TTGGATGAGT CTGCGTCGGC GCAGCTGA
 
Protein sequence
MQAANPRRGY ILGLSAYIIW GLFPLYFKAI AEVPAVEIII HRVLWSALFG ALLLMVWKHP 
GWWQELRDNP KRLAILALSG TLIAANWLTY VWSVNNGRML EASLGYYINP LVNVLLGMLI
LGERLRRMQW LAVGLAAIGV AQQVWQVGSL PWVSLVLALT FGFYGLIRKQ APIKALPGLV
VETWMLVPIA LAWLLFNPTA TSAQAEFWTT SEAWWLVAAG PVTLVPLVCF NAAARHLPYT
TLGFLQYLAP TLVLLQAVLL FGEHLSSSTL IAFMFIWAGL AVYSVDAWMS LRRRS