Gene Pfl01_5133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5133 
Symbol 
ID3717051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5768921 
End bp5770201 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content61% 
IMG OID 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_350861 
Protein GI77461354 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGGCG CGCTGTTCCT GGGTACCGCG GCCAACGCCG CGGTGCAGTC CATCGATAGA 
GTGGTGGCCA TCGTCGACAA CGATGTGGTC ATGCAGAGCC AGCTGGATCA ACGCGTCCAC
GAAGTTCAGC AAACCATCGC CAAGCGTGGC GGCGGTCTGC CGCCTCCGGG CGTGCTGGAT
CAACAGGTGC TCGAGCGCCT GATCGTCGAA AACCTGCAAC TGCAGATCGG CGAACGCTCC
GGTATCCGCA TCACCGATGA AGAACTGAAC CAGGCTGTCG GCACCATTGC CCAGCGCAAC
AACATGACCC CGGAACAGTT CCGTATCGCC CTGTCCCGTG ATGGCCTGTC CTATGAGGAC
GCTCGCGAGC AGATCCGCCG CGAAATGGTC ATCAGCCGTG TGCGCCAGCG CCGCGTGGCC
GAGCGCATTC AGGTCTCGGA ACAGGAAGTG AAGAACTTCC TCGCCTCCGA TCTGGGCAAG
ATGCAACTGT CCGAAGAACT GCACCTGGCC AACATCCTGA TTCCGACCCC GGAAAGCGCC
AACTCCGAAG CGATTCAGAG TGCTGCCCGC AAGGCGATGG AGGTTTACCA GCAGCTCAAG
CAAGGTGCTG ACTTCGGCCA GATGGCCGTG GCCAACTCCG CCAGTGACAA CGCGCTGGAA
GGCGGCGATA TGGGCTGGCG TAAAGCCGCT CAACTGCCAC CGCCGTTCGA CCGTGAACTG
AGCAGCATGG CGACTGGCGA CATCACTCAA CCGGCACGCA CTCCGGGTGG TTTCATCATC
CTGAAGCTGC TGGAAAAACG TGGTGGCGAG AGCCAGATGC GCGACGAAGT GCATGTGCGC
CACATTCTGG TCAAGCCAAG TCCGGTTCGC GACGAAGCCA AGACCAAGGA ACTGGCCCAA
TCGCTCTACA ACCGCATCGA AGCCGGTGAA GATTTCGCCG AACTGGCCAA GAAGTATTCG
GAAGATCCGG GCTCTGCCCT CAACGGCGGC GACCTGAACT GGATCGACCC GAACGCACTG
GTACCGGAAT TCCGCGCCGT GATGGCCAAG TCCCCGCAGG GTCAGCTGTC CAAGCCGTTC
CAGACCCAGT ACGGCTGGCA CGTTCTGGAA GTCCTTGGCC GTCGCGCCAC TGACAGCACC
GAACAGGCCC GTGAGCAGCA AGCGATGACC GTACTGCGTA ACCGCAAATA CGACGAAGAG
CTGCAGACCT GGCTGCGTCA GATCCGTGAC GAAGCGTACG TTGAGATCAA ACTCCCTGGT
GCAGACCAGG CAGCGCAGTG A
 
Protein sequence
MLGALFLGTA ANAAVQSIDR VVAIVDNDVV MQSQLDQRVH EVQQTIAKRG GGLPPPGVLD 
QQVLERLIVE NLQLQIGERS GIRITDEELN QAVGTIAQRN NMTPEQFRIA LSRDGLSYED
AREQIRREMV ISRVRQRRVA ERIQVSEQEV KNFLASDLGK MQLSEELHLA NILIPTPESA
NSEAIQSAAR KAMEVYQQLK QGADFGQMAV ANSASDNALE GGDMGWRKAA QLPPPFDREL
SSMATGDITQ PARTPGGFII LKLLEKRGGE SQMRDEVHVR HILVKPSPVR DEAKTKELAQ
SLYNRIEAGE DFAELAKKYS EDPGSALNGG DLNWIDPNAL VPEFRAVMAK SPQGQLSKPF
QTQYGWHVLE VLGRRATDST EQAREQQAMT VLRNRKYDEE LQTWLRQIRD EAYVEIKLPG
ADQAAQ