Gene Pfl01_5132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5132 
Symbol 
ID3717050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5766091 
End bp5768904 
Gene Length2814 bp 
Protein Length937 aa 
Translation table11 
GC content59% 
IMG OID 
Productorganic solvent tolerance protein 
Protein accessionYP_350860 
Protein GI77461353 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.563491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTGA AATCCCCCGC GTTTCGTAAA AAATTTCCGT TGTTGGTAAC CGGCAGTCTG 
CTGGCTATGC AACCTCTGGC CAGTTCATTC GTTGTTGCCG CCGAGCAGTA TGACTGCGCC
GTCTCGGCAA CGGGTGGCTG GGCCTGCTCG CCGAAGACGC CGGCCGCTGC CTTGCCGCCG
CGTCCCGTGC ATGACGGCAG TGCCGTCAGC GCCGCTGGCG AAGCCCCGGC CGAGAGCGGC
TCCACTGCGG AGTCCGGGCC CAAGCCGGTA CTGGTTACCG AGTCCAAGGG CCGTGGCCTG
AAATCCCGTA GCGAAGACTA CAGTCACCTC GACTGGGTTC CGCGCGAGAA GCTCACCGCC
GCCCAACTGG CCGAGACCGG TCCTTACTGC TCTGGTTCCT ATATCGAACC GATTCGTCCT
GGCATGAATG ACAAGACGAA TAAAAGTGAC GCCCCGACCT TCATCGGCGC CAAGGCGTCG
CGTTATCAGC AGGATTCGCA GGTTGCGAGT CTGGCCGGTG ACGTGGTCAT GCGTCAGGGC
AGCATGCAGG TCGAAGCCGA CGAGGCCAAC CTGTATCAGG CCGAAAGCCG TGGCGAACTG
GCCGGCAACG TGCGCATTCG CGACAACGGC GCGCTGATCG TCGGTGACCA CGCCGATGTG
CAGCTCGACA CCGGTGAAGC CAAGGTCGAC AACGCCGAAT ACGTCATGCA CAAGTCGCGC
ATCCGCGGTA ACGCGCTGTA CGCCAAGCGT GCCGAAAACG CGATCATCCG TCTGAAGGAC
GGCACGTACA CCACGTGCGA ACCGAACAGC AACGCCTGGC AGCTCAAGGG CAACAACATC
ACCCTGAACC CTGCCACCGG CTTCGGTACC GCGACCAACG TGACGCTGCG GGTCAAGGAC
ATTCCGGTCC TGTACACCCC GTACATCTAC TTCCCGATCG ACGATCGTCG TCAGTCGGGT
TTCCTGCCGC CGACCATCGG CACCGGCAGC GACACCGGCT TCATGCTGGT GACCCCGTAC
TACTTCAACC TGGCACCGAA CTACGATGCC ACGTTGTATC CACGCTACAT GGCTAAACGC
GGTCTGTTGA TGGAGGGCGA ATTCCGCTAC CTCACCAAGT CCAGCGAAGG GCAGTTCGGT
GCGGCGTTCC TCAACGACGA GGAAACCGAG CGCAGCAAAC AGACCGACTA CCAGAAGAAT
CGCTACATGT ACAACTGGCA ACACAAGGGT GGTCTCGACT CCCGCGTGTT CACCCAGGTG
GACTACACCA AGATCAGCGA TCCGTACTAC TTCCAGGATC TGCAGACCGA TCAGATCGGT
GTGAAGAGCG CCGACTTCGT GAACCAGCAG GGCTCGGTTA CCTATCGTGG CGACAACTAC
ACCGCGCGCC TGAATGCGCA GGCCTACCAA CTTGCCACCG TATCGAACAT CACACCGTAT
GACCGTCTGC CGCAGATCAC CTTCAATGGT CAGCTGCCGT ATCACCCGGA AGGTCTGAAC
TTCGATTACG AGACCGAGGT CGTTCGCTTC GACCGTGACC TGCAAAATGG CAACTTCGTT
AATGAAGACG GCACTGTGGA ACGCCGCCTG GACAATAACG TCATCGGCCT GGCCCGTGCC
AACGGCGATC GTTTGAACCT GAAGCCAAGC GTCAGCCTGC CGCTCAACTG GACCTACGGT
TTCCTCAAGC CATCGCTCAA GTACCAGTAC ACCCAGTACC AGCTGGATCT GGACGGGACC
GGCAAGAGCC AGATCGTCGC TCAACAGAAC GCGGCAGCCG CGACCGGCAC CCGCTATGTC
GGCGGTGAAT TCGGCAGCAG CCAGAACCGT GGCGTACCGA TCGCCAGCAT CGATGGCGGC
CTGTACTTCG ACCGCAACAC CACCTGGTTC GGCAAGAATT ATCGCCAGAC CCTGGAACCT
CGCCTGTTCT ATCTCTATGT ACCCGAGAAA GACCAGGAAG ACATTCCAGT CTTCGATACC
AGCGAATACA CCTTCAACTA TGCGTCGCTG TTCCGTGACA ACCGCTTCTC CGGCTCCGAC
CGCGTCGGTG ACGAGAACAA ACTGTCGCTG GGCATCGACA ACCGCTGGAT CGAGGAAGAC
GGCTTCGAGC GTCAACGCAT CAGTATCGGT CAGGCACTCT ACTTCAAGGA TCGTGAAGTC
CAGTTGCCGG GCATTGATCC GAAGACCCGC GACGACGCGC ATTCCAATGT TTCGCCGTAC
GCTCTGGAAT ACGAGTACCG CTGGAACCGC GACTGGCGCA CCACTGCCGA TTACAACTGG
GATCCGGACA GCCGCAGCCC ACGCTCCGGC AGTGCAATGC TCCACTACCA GCCTGAAGAC
AACCCGAACA AGGTGGTCAA CGTCGGTTAT CGCTATCGCA ACGACCAGGT TCGTTACGAC
CAGAACACCG GTAAATGGTC GGTGGGCGGC GGTGACTACG GCACACCGGG CCAGCCTGGC
TACGTGAAGG ACTACTACAA GATCCAGCAG CATGACTTCT CGGTCATCTG GCCGATCGTT
CCGCAGTGGA GCGCGATCAG CCGCTGGCAG TACGACTACA ACCGCAATCG CACGCTGGAA
GCCTTCGGTG GTTTCGAATA TGACAACTGC TGCTGGAAAC TGCGCCTGAT CAACCGTTAC
TGGGTCAGCT ATGACGAATT CAGTCAGAAC GCCCCGGAAA ACGAAAAAGG CGACCACGGC
GTCTTCCTCC AAATTGTTCT GAAGGGACTC GGCGGCCTCA CCGGCGCCAA GGTAGAGAGC
TTCCTCGACA AAGGCATCCA AGGTTATCGT CAACGTGAAG ACCAAGCTTT CTGA
 
Protein sequence
MALKSPAFRK KFPLLVTGSL LAMQPLASSF VVAAEQYDCA VSATGGWACS PKTPAAALPP 
RPVHDGSAVS AAGEAPAESG STAESGPKPV LVTESKGRGL KSRSEDYSHL DWVPREKLTA
AQLAETGPYC SGSYIEPIRP GMNDKTNKSD APTFIGAKAS RYQQDSQVAS LAGDVVMRQG
SMQVEADEAN LYQAESRGEL AGNVRIRDNG ALIVGDHADV QLDTGEAKVD NAEYVMHKSR
IRGNALYAKR AENAIIRLKD GTYTTCEPNS NAWQLKGNNI TLNPATGFGT ATNVTLRVKD
IPVLYTPYIY FPIDDRRQSG FLPPTIGTGS DTGFMLVTPY YFNLAPNYDA TLYPRYMAKR
GLLMEGEFRY LTKSSEGQFG AAFLNDEETE RSKQTDYQKN RYMYNWQHKG GLDSRVFTQV
DYTKISDPYY FQDLQTDQIG VKSADFVNQQ GSVTYRGDNY TARLNAQAYQ LATVSNITPY
DRLPQITFNG QLPYHPEGLN FDYETEVVRF DRDLQNGNFV NEDGTVERRL DNNVIGLARA
NGDRLNLKPS VSLPLNWTYG FLKPSLKYQY TQYQLDLDGT GKSQIVAQQN AAAATGTRYV
GGEFGSSQNR GVPIASIDGG LYFDRNTTWF GKNYRQTLEP RLFYLYVPEK DQEDIPVFDT
SEYTFNYASL FRDNRFSGSD RVGDENKLSL GIDNRWIEED GFERQRISIG QALYFKDREV
QLPGIDPKTR DDAHSNVSPY ALEYEYRWNR DWRTTADYNW DPDSRSPRSG SAMLHYQPED
NPNKVVNVGY RYRNDQVRYD QNTGKWSVGG GDYGTPGQPG YVKDYYKIQQ HDFSVIWPIV
PQWSAISRWQ YDYNRNRTLE AFGGFEYDNC CWKLRLINRY WVSYDEFSQN APENEKGDHG
VFLQIVLKGL GGLTGAKVES FLDKGIQGYR QREDQAF