Gene Pfl01_5130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5130 
Symbol 
ID3717048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5764273 
End bp5764944 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content62% 
IMG OID 
Productnucleotidyl transferase 
Protein accessionYP_350858 
Protein GI77461351 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCAA TGATTCTGGC GGCCGGCAAA GGCGAGCGCA TGCGCCCGCT GACCCTGACC 
ACCCCCAAAC CGCTGGTGCG AGCCGGCGGC GTGCCGCTGA TTGAATATCA CCTGCGTGCC
CTGGCCGCGG CCGGTTTCAA CGAGATCGTG ATCAACCATG CCTGGCTCGG ACAGCAGATC
GAAGATCATC TGGGCGATGG TTCGCAATTC GGCGTGTCGA TCCAGTACTC GCCTGAAGGG
GAACCTTTGG AAACCGGCGG CGGAATTTTC CGCGCCTTGC CGCTGTTGGG CGAAGACGCG
TTTCTGGTGG TCAACGGTGA CATCTGGACC GATTACGACT TCAGCGTGCT GCATCAGCCG
ATCAACGGCC TGGCGCATCT GGTGCTGGCG GACAATCCGG CGCATCACCC GACAGGGGAT
TTCACCCTGA CCGACGGCCA GGTGCGTGAT GGCCAGGCCG ATTTGGCAAC CCTGACCTAC
AGCGGCATAG CCGTACTGCA TCCGCAGTTG TTCGACGGCT GCCGCGACGG TGCCTTCAAA
CTGGCGCCGC TGTTGCGTAA AGCCATGGCG GACGGGCAGG TGACCGGCGA GCGGTTGAAG
GGGCACTGGG TCGATGTCGG TACGCACGAG CGTCTGGCCG AAGCTGAAGC CTTGATAGAA
GCGAGTCGCT GA
 
Protein sequence
MKAMILAAGK GERMRPLTLT TPKPLVRAGG VPLIEYHLRA LAAAGFNEIV INHAWLGQQI 
EDHLGDGSQF GVSIQYSPEG EPLETGGGIF RALPLLGEDA FLVVNGDIWT DYDFSVLHQP
INGLAHLVLA DNPAHHPTGD FTLTDGQVRD GQADLATLTY SGIAVLHPQL FDGCRDGAFK
LAPLLRKAMA DGQVTGERLK GHWVDVGTHE RLAEAEALIE ASR