Gene Pfl01_5093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5093 
Symboltuf 
ID3716092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5722362 
End bp5723555 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content55% 
IMG OID 
Productelongation factor Tu 
Protein accessionYP_350821 
Protein GI77461314 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000584025 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGG AAAAATTTGA TCGTTCCCTG CCGCACGTCA ACGTTGGCAC CATCGGTCAC 
GTAGACCACG GTAAGACCAC GCTGACCGCT GCTCTGACTC GCGTCTGCTC CGAAGTTTTC
GGTTCGGCCG TAGTTGAATT CGACAAGATC GACAGCGCTC CAGAAGAAAA AGCTCGCGGT
ATCACCATCA ATACCGCGCA CGTTGAGTAC AACTCGAACA TTCGTCACTA CGCTCACGTT
GACTGCCCAG GTCACGCTGA CTACGTGAAG AACATGATCA CTGGTGCTGC GCAGATGGAC
GGCGCGATCC TGGTTTGCTC GGCCGCTGAT GGTCCGATGC CACAAACTCG TGAGCACATC
CTGCTGTCCC GTCAGGTAGG CGTTCCGTAC ATCGTGGTTT TCCTGAACAA GGCTGACCTG
GTAGACGACG CTGAGCTGCT GGAACTGGTT GAGATGGAAG TTCGCGACCT GCTGTCCACC
TACGACTTCC CAGGCGACGA CACTCCTATC ATCATCGGTT CGGCTCGTAT GGCGCTGGAA
GGCAAAGACG ACAACGAAAT GGGCACCACC GCTGTTAAGA AGCTGGTGGA AACTCTGGAC
AGCTACATCC CAGAGCCAGA GCGTGCTATC GACAAGCCAT TCCTGATGCC AATCGAAGAC
GTATTCTCGA TCTCGGGTCG CGGTACTGTT GTAACCGGTC GTATCGAGCG CGGTATCGTT
CGCGTTCAAG ACGCCCTGGA AATCGTTGGT CTGCGTGACA CCACCACCAC CACCTGCACC
GGTGTTGAGA TGTTCCGCAA GCTGCTGGAC GAAGGTCGTG CTGGCGAGAA CTGCGGCGTT
CTGCTGCGTG GTACCAAGCG TGACGACGTT GAGCGTGGTC AGGTTCTGGT TAAGCCGGGT
TCGGTTAAGC CGCACACCAA GTTCACCGCA GAAGTTTACG TTCTGAGCAA GGAAGAAGGC
GGTCGTCACA CTCCGTTCTT CAAAGGCTAT CGTCCACAGT TCTACTTCCG TACTACTGAC
GTGACCGGTA ACTGCGAGCT GCCAGAAGGC GTTGAAATGG TAATGCCAGG TGACAACATT
CAGATGACTG TTACCCTGAT CAAAACCATC GCTATGGAAG ACGGTCTGCG TTTCGCAATC
CGTGAAGGCG GCCGTACCGT TGGTGCTGGC GTCGTAGCCA AGATCATCGA GTAA
 
Protein sequence
MAKEKFDRSL PHVNVGTIGH VDHGKTTLTA ALTRVCSEVF GSAVVEFDKI DSAPEEKARG 
ITINTAHVEY NSNIRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI
LLSRQVGVPY IVVFLNKADL VDDAELLELV EMEVRDLLST YDFPGDDTPI IIGSARMALE
GKDDNEMGTT AVKKLVETLD SYIPEPERAI DKPFLMPIED VFSISGRGTV VTGRIERGIV
RVQDALEIVG LRDTTTTTCT GVEMFRKLLD EGRAGENCGV LLRGTKRDDV ERGQVLVKPG
SVKPHTKFTA EVYVLSKEEG GRHTPFFKGY RPQFYFRTTD VTGNCELPEG VEMVMPGDNI
QMTVTLIKTI AMEDGLRFAI REGGRTVGAG VVAKIIE