Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5088 |
Symbol | rplJ |
ID | 3715950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5719333 |
End bp | 5719833 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | 50S ribosomal protein L10 |
Protein accession | YP_350816 |
Protein GI | 77461309 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000128873 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.821712 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAATTA ATCTCGAAGA CAAGAAGGCC ATCGTCGCTG AAGTCAACGA GGCTGCCAAA GTCGCTCTGT CCGCTGTCGT GGTTGATGCA CGTGGCGTAA CAGTAGGCGC AATGACCGGA CTCCGTAAAG AGGCTCGTGA AGCTGGCGTT TACGTACGTG TTGTACGTAA CACCCTGCTC AAGCGCGCTG TTGCTGGCAC TTCGTATGAA GTGCTGAACG ACGCGTTCAC TGGCCCGACC CTGATCGCAT TCTCCAACGA ACACCCGGGC GCTGCTGCTC GTCTGTTCAA GGAATTTGCC AAGGGTCAGG ATAAGTTCGA GATCAAGGCA GCTTCGTTCG AGGGCAAGTT CCTCGCAGCG AATGAGATCG ACGTGCTGGC AAGCCTGCCA ACTCGCGACG AAGCTATTGC GAAACTGATG AGCGTGATTC AAGGCGCTAC CAGCAAGCTG GCTCGTACTC TGGCGGCAAT TCGCGATCAG AAAGAAGCAG CTGCAGCCTG A
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Protein sequence | MAINLEDKKA IVAEVNEAAK VALSAVVVDA RGVTVGAMTG LRKEAREAGV YVRVVRNTLL KRAVAGTSYE VLNDAFTGPT LIAFSNEHPG AAARLFKEFA KGQDKFEIKA ASFEGKFLAA NEIDVLASLP TRDEAIAKLM SVIQGATSKL ARTLAAIRDQ KEAAAA
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