Gene Pfl01_5081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5081 
Symboltuf 
ID3715943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5705801 
End bp5706994 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content56% 
IMG OID 
Productelongation factor Tu 
Protein accessionYP_350809 
Protein GI77461302 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000406478 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.302135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTAAAG AAAAATTTGA TCGTTCCCTA CCGCACGTAA ACGTTGGCAC CATCGGCCAC 
GTTGACCACG GTAAAACCAC TCTGACCGCT GCTCTGACTC GCGTCTGCTC CGAAGTTTTC
GGTTCGGCCG TAGTTGAATT CGACAAGATC GACAGCGCTC CAGAAGAAAA AGCTCGCGGT
ATCACCATCA ACACCGCGCA CGTTGAGTAC AACTCGAACA TTCGTCACTA CGCTCACGTT
GACTGCCCAG GTCACGCTGA CTACGTGAAG AACATGATCA CTGGTGCTGC GCAGATGGAC
GGCGCGATCC TGGTTTGCTC GGCCGCTGAT GGTCCGATGC CGCAAACCCG TGAGCACATC
CTGCTGTCCC GTCAGGTAGG CGTTCCGTAC ATCGTGGTTT TCCTGAACAA GGCTGACCTG
GTAGACGACG CTGAGCTGCT GGAACTGGTT GAGATGGAAG TTCGCGACCT GCTGTCCACC
TACGACTTCC CAGGCGACGA CACTCCGATC ATCATCGGTT CGGCTCGTAT GGCGCTGGAA
GGCAAAGACG ACAACGAAAT GGGCACCACC GCTGTTAAGA AGCTGGTGGA AACTCTGGAT
AGCTACATCC CAGAGCCAGA GCGTGCTATC GACAAGCCAT TCCTGATGCC AATCGAAGAC
GTGTTCTCGA TCTCGGGTCG CGGTACTGTT GTGACCGGTC GTATCGAGCG CGGTATCGTT
CGCGTTCAAG ACGCCCTGGA AATCGTTGGT CTGCGTGACA CCACCACCAC CACCTGCACC
GGTGTTGAGA TGTTCCGCAA GCTGCTGGAC GAAGGTCGTG CTGGCGAGAA CTGCGGCGTT
CTGCTGCGTG GCACCAAGCG CGACGACGTT GAGCGTGGTC AGGTTCTGGT TAAGCCGGGT
TCGGTTAAGC CGCACACCAA GTTCACCGCA GAAGTTTACG TTCTGAGCAA GGAAGAAGGC
GGTCGTCACA CTCCGTTCTT CAAAGGCTAC CGTCCACAGT TCTACTTCCG TACTACTGAC
GTGACCGGTA ACTGCGAGCT GCCAGAAGGC GTTGAAATGG TAATGCCAGG TGACAACATT
CAGATGACTG TTACCCTGAT CAAAACCATC GCTATGGAAG ACGGTCTGCG TTTCGCAATC
CGTGAAGGCG GCCGTACCGT TGGTGCTGGC GTCGTAGCTA AAATCATCGA GTGA
 
Protein sequence
MAKEKFDRSL PHVNVGTIGH VDHGKTTLTA ALTRVCSEVF GSAVVEFDKI DSAPEEKARG 
ITINTAHVEY NSNIRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI
LLSRQVGVPY IVVFLNKADL VDDAELLELV EMEVRDLLST YDFPGDDTPI IIGSARMALE
GKDDNEMGTT AVKKLVETLD SYIPEPERAI DKPFLMPIED VFSISGRGTV VTGRIERGIV
RVQDALEIVG LRDTTTTTCT GVEMFRKLLD EGRAGENCGV LLRGTKRDDV ERGQVLVKPG
SVKPHTKFTA EVYVLSKEEG GRHTPFFKGY RPQFYFRTTD VTGNCELPEG VEMVMPGDNI
QMTVTLIKTI AMEDGLRFAI REGGRTVGAG VVAKIIE