Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5042 |
Symbol | |
ID | 3713698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5679358 |
End bp | 5679912 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | isochorismatase hydrolase |
Protein accession | YP_350770 |
Protein GI | 77461263 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00512316 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCCAAGC AAGCGCTCAT CGTAGTCGAT ATCCAGAACG ACTACTTCCC CCAAGGCAAG TGGCCGCTGG CCGGTGCCGA CGCCGCCGCC GACAACGCCG CCCGGTTGAT CGCGGCCTTC CGCGAGGCCG GCGATTCGGT GGTGCACATC CGCCACGAAT TCACCTCGCC CGAGGCGCCG TTTTTCACTC CGGGCTCCGA GGGCGCCAAG CTGCATCCGA AAGTGCTCAA CCGCGCCGAC GAGCCGGTGG TCCTCAAGCA CTTCGTCAAC TCGTTCCGCG AAACCGAGCT GCAATCGATC CTCGACGAGC AAGGCATCAA GGAGCTGGTG GTGGTCGGCA GCATGAGCCA CATGTGCGTC GATGGCGTTA CTCGCGCGGC GGCCGATCTG GGTTACACCG TTACGGTGAT CCACGATGCT TGCGCCAGCC GTGACCTGGA ATTCAACGGT CTGACCGTGC CCGCCGCCCA CGTGCATGCG GCGTTCATGT CGGCGCTGGG GTTTGCCTAT GCCAGCGTGG TATCCACCGA CGAGTTCCTC GCTGCCAGCC GCTAA
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Protein sequence | MAKQALIVVD IQNDYFPQGK WPLAGADAAA DNAARLIAAF REAGDSVVHI RHEFTSPEAP FFTPGSEGAK LHPKVLNRAD EPVVLKHFVN SFRETELQSI LDEQGIKELV VVGSMSHMCV DGVTRAAADL GYTVTVIHDA CASRDLEFNG LTVPAAHVHA AFMSALGFAY ASVVSTDEFL AASR
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