Gene Pfl01_5038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5038 
Symbol 
ID3713694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5675240 
End bp5676241 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350766 
Protein GI77461259 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00557373 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCCAAT CCGAAGCCCA CGCGGCGGTG CATCCGACAC CGGCGGGCAA GTCCCGCTGG 
AGTCGCTGGA AACGTCCGCT GACCTTGTTG TTCTTTCTGG CGCTGATCGT TTTGCTGACG
ATGTTCGCCA GTCGCATCGA ATGGGCCGAA GTGCTGCAAA CCCTCGCCGA CTTCAAGGTG
CGCACCCTGA TCATTGCCTC CAGCCTGACC TTGCTGAGCT TTCTGGTGTA CGCCAGTTTC
GACCTGATCG GCCGCACCTA CATTCGTCAG GACCTGACGT GGAAACAGAT CCTGCCGGTG
GGCGTCATCA GCTATGCGTT CAACCTCAAT TTGAGCGCGT GGGTCGGCGG GATCGCCATG
CGTTATCGGT TGTATTCGAG GCTCGGGGTG AGCAAAAGCA ACATCGCCAA GATCCTCGGC
CTGAGCCTGG CGACCAACTG GTTCGGCTAC ATGACCATCG CCGGCGTGGT GTTCGCCAGC
GGGCTGGTGC GGATGCCACC GGGCTGGAAA ATCAGCAGCG GTGCGTTGCA GGGCATTGGC
GTGTTGCTGC TGTTGGTCAG TGTCGGCTAT CTGGTCGCCT GCCAGTTTTC CCGGCGGCGC
GAGTGGTCGA TTCGCGGGGT GGAAATCAAC CTGCCGTCGC TGCGCATGGC GGTCCTGCAA
TTGCTGCTCG GGGCATTGAA CTGGTCGCTC ATGGCAGCCG TGATTTTCAC CTTGCTGCCG
AGCAAACTCG ACTATCCGCT GGTGCTCGGA GTGCTGTTGA TCAGCGCGAT TGCCGGGGTC
ATCACCCACA TTCCCGCCGG GCTCGGCGTG CTGGAAGCGG TGTTCGTGGC GCTGCTGCAA
CACGAGGCTT CGCGCGGCAG TCTGGTGGCA GGATTGCTGG CCTATCGGGC AATCTATTTC
CTGCTGCCGC TGCTGATCAC AGTGCTGATG TACCTGGTGG TGGAAGCCAA GGCCAAGGCA
TTGCGGATCG AGAAGAAACC CAAATCTGAT CAGCGGGACT GA
 
Protein sequence
MSQSEAHAAV HPTPAGKSRW SRWKRPLTLL FFLALIVLLT MFASRIEWAE VLQTLADFKV 
RTLIIASSLT LLSFLVYASF DLIGRTYIRQ DLTWKQILPV GVISYAFNLN LSAWVGGIAM
RYRLYSRLGV SKSNIAKILG LSLATNWFGY MTIAGVVFAS GLVRMPPGWK ISSGALQGIG
VLLLLVSVGY LVACQFSRRR EWSIRGVEIN LPSLRMAVLQ LLLGALNWSL MAAVIFTLLP
SKLDYPLVLG VLLISAIAGV ITHIPAGLGV LEAVFVALLQ HEASRGSLVA GLLAYRAIYF
LLPLLITVLM YLVVEAKAKA LRIEKKPKSD QRD