Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5038 |
Symbol | |
ID | 3713694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5675240 |
End bp | 5676241 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_350766 |
Protein GI | 77461259 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00557373 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGAGCCAAT CCGAAGCCCA CGCGGCGGTG CATCCGACAC CGGCGGGCAA GTCCCGCTGG AGTCGCTGGA AACGTCCGCT GACCTTGTTG TTCTTTCTGG CGCTGATCGT TTTGCTGACG ATGTTCGCCA GTCGCATCGA ATGGGCCGAA GTGCTGCAAA CCCTCGCCGA CTTCAAGGTG CGCACCCTGA TCATTGCCTC CAGCCTGACC TTGCTGAGCT TTCTGGTGTA CGCCAGTTTC GACCTGATCG GCCGCACCTA CATTCGTCAG GACCTGACGT GGAAACAGAT CCTGCCGGTG GGCGTCATCA GCTATGCGTT CAACCTCAAT TTGAGCGCGT GGGTCGGCGG GATCGCCATG CGTTATCGGT TGTATTCGAG GCTCGGGGTG AGCAAAAGCA ACATCGCCAA GATCCTCGGC CTGAGCCTGG CGACCAACTG GTTCGGCTAC ATGACCATCG CCGGCGTGGT GTTCGCCAGC GGGCTGGTGC GGATGCCACC GGGCTGGAAA ATCAGCAGCG GTGCGTTGCA GGGCATTGGC GTGTTGCTGC TGTTGGTCAG TGTCGGCTAT CTGGTCGCCT GCCAGTTTTC CCGGCGGCGC GAGTGGTCGA TTCGCGGGGT GGAAATCAAC CTGCCGTCGC TGCGCATGGC GGTCCTGCAA TTGCTGCTCG GGGCATTGAA CTGGTCGCTC ATGGCAGCCG TGATTTTCAC CTTGCTGCCG AGCAAACTCG ACTATCCGCT GGTGCTCGGA GTGCTGTTGA TCAGCGCGAT TGCCGGGGTC ATCACCCACA TTCCCGCCGG GCTCGGCGTG CTGGAAGCGG TGTTCGTGGC GCTGCTGCAA CACGAGGCTT CGCGCGGCAG TCTGGTGGCA GGATTGCTGG CCTATCGGGC AATCTATTTC CTGCTGCCGC TGCTGATCAC AGTGCTGATG TACCTGGTGG TGGAAGCCAA GGCCAAGGCA TTGCGGATCG AGAAGAAACC CAAATCTGAT CAGCGGGACT GA
|
Protein sequence | MSQSEAHAAV HPTPAGKSRW SRWKRPLTLL FFLALIVLLT MFASRIEWAE VLQTLADFKV RTLIIASSLT LLSFLVYASF DLIGRTYIRQ DLTWKQILPV GVISYAFNLN LSAWVGGIAM RYRLYSRLGV SKSNIAKILG LSLATNWFGY MTIAGVVFAS GLVRMPPGWK ISSGALQGIG VLLLLVSVGY LVACQFSRRR EWSIRGVEIN LPSLRMAVLQ LLLGALNWSL MAAVIFTLLP SKLDYPLVLG VLLISAIAGV ITHIPAGLGV LEAVFVALLQ HEASRGSLVA GLLAYRAIYF LLPLLITVLM YLVVEAKAKA LRIEKKPKSD QRD
|
| |