Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5015 |
Symbol | nusB |
ID | 3714681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5651077 |
End bp | 5651577 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | transcription antitermination protein NusB |
Protein accession | YP_350743 |
Protein GI | 77461236 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.395212 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATTAGCG ACGAAAGCGA TCGTTTCAAC CCGCGCGATC CGAAACCTGC GGATGCCGGC AAGCCATCGA AAAGCGCCAA GCGTCGCGAA GCCCGTCAGC TCGCGACCCA GGCCCTGTAT CAGTGGCACA TGGCTCGGCA GTCGTTGAAC GAGATCGAAG CGCAGTTCCG GGTCGATAAC GATTTCACCG ATGTCGACGG TGCTTACTTC CGCGAAATCC TCCACGGGGT TCCGCAGTTC AAGACCGAAA TCGACAACGC GCTCACGCCT TGCCTGGACC TGGCGATCGA AGAGCTGGAT CCGGTTGAAC TGGCGGTTCT GCGCCTGTCC ACCTGGGAAC TGCTCAAGCG CGTCGACGTG CCGTATCGCG TTGTGATCAA CGAAGGTATC GAACTGGCCA AGGTGTTCGG TTCGACCGAC GGCCACAAGT TCGTCAACGG CGTGCTCGAC AAGCTGGCTC CGCGCCTGCG TGAAGCTGAA GTGAAGGCGT TCAAGCGCTG A
|
Protein sequence | MISDESDRFN PRDPKPADAG KPSKSAKRRE ARQLATQALY QWHMARQSLN EIEAQFRVDN DFTDVDGAYF REILHGVPQF KTEIDNALTP CLDLAIEELD PVELAVLRLS TWELLKRVDV PYRVVINEGI ELAKVFGSTD GHKFVNGVLD KLAPRLREAE VKAFKR
|
| |