Gene Pfl01_5009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5009 
Symbol 
ID3714675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5646864 
End bp5647664 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content64% 
IMG OID 
Productperiplasmic binding protein 
Protein accessionYP_350737 
Protein GI77461230 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.756494 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGTC TCTGGCTGGC GGTTCTGCTG CTGGCCGTCA GCGGTGAAAC GCTGGCCGCC 
CTGCGGGTGG TCAGCCTTGC GCCATCCCTG TCTGAAATCG TTGTCGAACT GGATTCGGCC
GACCTGTTGG TCGGGGTGCT GGATGGCGGT GAGCGGCCAT CCGCGATCAA GGACGTGCCT
TCGGTGGGCC GTTATGGCCA GCTTGACATG GAGCGGCTGC TCAGCCTCAA ACCTGACTTG
TTGCTGTTGT GGCCCGGCAG TGTCGGCCCG GCTCAACGTG ATCAGCTCAA GCGCCTGAAC
ATCCCGACGT TCGTTGCCGA GCCTCACAGT CTCGAACAGC TGACTGCGCA GATTGAGGCC
ATCGCGATAC AGCTCGGTCG TCCTGAGCGT GGGGTCGAAT GGGCTGCGGC GCTGCGGCGC
AACCTTGATG AACTGCGCCA ACGCTACCGC CGGGAAACGC CGCTGCGGGT GTTCTATCAG
ATCTGGGACG CGCCGCTGTA CACCGTCGGC GGCGGGCAGA TCATCAGCGA TGCGCTTGAA
GTGTGCGGCG CGCGCAATGT GTTTGCCGAT TTGAGCCTGC CCGCGCCGCA GGTGAGCATC
GAGGCGGTTT TACAGCGTGA TCCCGAAGTG ATTCTCGCCG GCGATCAGCC GCAACTCGAT
GCGTGGAACG CCTGGCCGCA GGTCACAGCG GTGAAGCATC GGCAATTACT GCTGGTCACC
GACAAAGGTC TGGAGCGCCC GAGCGGGCAG ATGATCGAGG CGACCGCCAA ACTCTGCCAC
CTGATCGCGC CAGATCGTTA G
 
Protein sequence
MRRLWLAVLL LAVSGETLAA LRVVSLAPSL SEIVVELDSA DLLVGVLDGG ERPSAIKDVP 
SVGRYGQLDM ERLLSLKPDL LLLWPGSVGP AQRDQLKRLN IPTFVAEPHS LEQLTAQIEA
IAIQLGRPER GVEWAAALRR NLDELRQRYR RETPLRVFYQ IWDAPLYTVG GGQIISDALE
VCGARNVFAD LSLPAPQVSI EAVLQRDPEV ILAGDQPQLD AWNAWPQVTA VKHRQLLLVT
DKGLERPSGQ MIEATAKLCH LIAPDR