| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5007 |
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| Symbol | |
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| ID | 3714673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 5642933 |
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| End bp | 5644831 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_350735 |
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| Protein GI | 77461228 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACGA CGTTTCATGA GATTCCCCGC AAGCGCCCGA CCACGCCCCT GCTCGACCGC
GCGAACACGC CGGACGGCCT GCGCCGGTTA GGCGAAGCCG AGCTGGAAAC CCTGGCTGAT
GAGTTGCGCC TGGAATTGCT CTACACGGTC GGCCAGACCG GTGGGCACTT CGGTGCCGGC
CTGGGCGTCA TCGAGCTGAC CATCGCGTTG CATTACGTCT TCGACACCCC GGACGACCGG
TTGGTGTGGG ACGTCGGTCA TCAGGCCTAT CCGCACAAGA TCCTCACCGG TCGTCGCGAG
CGCATGGAAA CCCTGCGCCA GAAGGACGGC ATCGCCGCCT TCCCGCGCCG TTCCGAGAGC
GAGTACGACA CCTTCGGCGT CGGCCACTCC AGCACCTCGA TCAGTGCCGC GCTGGGCATG
GCCATCGCCG CCCGCCTGCA GAACAGCGAT CGCAAGGCGA TTGCGGTGAT CGGCGACGGC
GCCCTGACCG CCGGCATGGC CTTCGAGGCG CTGAACCACG CGCCGGAAGT CGACGCCAAC
ATGCTGGTGA TCCTCAACGA CAACGACATG TCGATCTCGC GCAACGTCGG CGGTCTGTCG
AACTATCTGG CGAAGATCCT TTCCAGCCGC ACTTACGCGA GCATGCGTGA GGGCAGCAAG
AAAGTGCTGT CGCGCCTGCC CGGTGCCTGG GAAATCGCCC GTCGTACCGA AGAGTACGCA
AAAGGCATGC TGGTCCCCGG CACCCTGTTC GAAGAATTGG GCTGGAACTA CATCGGCCCG
ATCGACGGCC ACGACCTGCC GACCCTGATC GCCACCCTGC GCAACATGCG CGATCTGAAA
GGCCCGCAGT TCCTGCATAT CGTCACCAAG AAGGGCAAAG GCTTCGCACC GGCGGAAGTC
GACCCGATCG GTTACCACGC CATCACCAAA CTCGAACCGC TGGACGCCCC GGCCGCTGCG
CCGAAAAAGG CCGGCGGGCC GAAGTATTCC GGCGTGTTCG GTGAGTGGCT GTGCGACATG
GCCGCTGCCG ACCCGCGTCT GGTGGGCATC ACCCCCGCGA TGAAGGAAGG CTCGGATCTG
GTGGCGTTCA GCGAACGCTT CCCGCTGCGC TACTTCGACG TGGCGATTGC CGAGCAACAC
GCCGTGACCC TCGCCGCCGG CATGGCCTGC GAAGGCGCAA AACCGGTGGT GGCGATCTAC
TCGACATTCC TGCAGCGCGG TTATGACCAG TTGGTGCATG ACGTCGCGGT ACAGAACCTC
GACGTGCTGT TCGCCATCGA CCGCGCCGGT CTGGTGGGCG AAGACGGCCC GACCCACGCC
GGCAGTTTCG ACCTGTCGTT CCTGCGCTGC ATCCCGGGCA TGGTCATCAT GACCCCGAGC
GATGAAAATG AACTCCGCAA GATGCTCACC ACCGGCCACC TGTACAACGG CCCGGCGGCG
GTGCGTTACC CGCGCGGCAC CGGCCCGAAC GCGACCATCG AGAAAGACCT CGAACCGATC
GAGATCGGTA AGGGCGTGGT ACGTCGTCAG GGCAGCAAGG TCGCCCTGCT GGTGTTCGGC
GTGCAAATGG CCGAAGCCCT GAAAGTCGCC GAGACGCTGG ACGCGACCGT GGTCGACATG
CGTTTCGTCA AACCGATGGA CGAAGCGCTG GTACGCGAGA TCGCCAACAG CCACGACCTG
CTGGTGACCA TCGAAGAGAA CGCGATCATG GGCGGCGCCG GTGGCGCGGT CAGCGAATTC
CTCGCCCGCG AGAACATCCT CAAGTCGGTG CTGCACCTGG GCTTGCCGGA CGTTTACGTC
GAGCACGCCA AGCCGGCGCA AATGCTGGCC GAGTGCGGAC TGGATGAAGT GGGGATCGAA
GCGGCGGTGC GGGAGCGCCT GGAGCTGCTT AACCGCTAA
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| Protein sequence | MPTTFHEIPR KRPTTPLLDR ANTPDGLRRL GEAELETLAD ELRLELLYTV GQTGGHFGAG
LGVIELTIAL HYVFDTPDDR LVWDVGHQAY PHKILTGRRE RMETLRQKDG IAAFPRRSES
EYDTFGVGHS STSISAALGM AIAARLQNSD RKAIAVIGDG ALTAGMAFEA LNHAPEVDAN
MLVILNDNDM SISRNVGGLS NYLAKILSSR TYASMREGSK KVLSRLPGAW EIARRTEEYA
KGMLVPGTLF EELGWNYIGP IDGHDLPTLI ATLRNMRDLK GPQFLHIVTK KGKGFAPAEV
DPIGYHAITK LEPLDAPAAA PKKAGGPKYS GVFGEWLCDM AAADPRLVGI TPAMKEGSDL
VAFSERFPLR YFDVAIAEQH AVTLAAGMAC EGAKPVVAIY STFLQRGYDQ LVHDVAVQNL
DVLFAIDRAG LVGEDGPTHA GSFDLSFLRC IPGMVIMTPS DENELRKMLT TGHLYNGPAA
VRYPRGTGPN ATIEKDLEPI EIGKGVVRRQ GSKVALLVFG VQMAEALKVA ETLDATVVDM
RFVKPMDEAL VREIANSHDL LVTIEENAIM GGAGGAVSEF LARENILKSV LHLGLPDVYV
EHAKPAQMLA ECGLDEVGIE AAVRERLELL NR
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