Gene Pfl01_4992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4992 
Symbol 
ID3714950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5624620 
End bp5625444 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content62% 
IMG OID 
Productethanolamine ammonia-lyase small subunit 
Protein accessionYP_350720 
Protein GI77461213 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.98827 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAC CGCCCGTCGA TCCGCAAAAC CCGTGGCTGG AGCTGCGTCG TCTGACCCCG 
GCGCGCATTG CCCTCGGTCG TACCGGCACC AGTCTGCCGA CCCGTGCACA GCTGGATTTC
CAGTACGCCC ACGCCCAGGC GCGGGACGCC GTGCACTTGC CGTTCGATCA CGCCGCGCTG
AGTGCTCAAC TGAATGAACG CCAGCGTGAA AGTCTGCTGC TGCACAGCGC GGCGGTGGAT
CGCAACAGCT ACCTGCAACG CCCGGATCTG GGGCGCAAGT TGAGCGATCA ATCGGCGCAA
ACCCTGCGCG AATACGCCCA GGCGCATCCG GGCGGTGTGG ATCTGGTAAT TGTGGTGGCG
GACGGTCTCT CGGCGCTGGC GGTGCATCGG CACACCCTGC CGTTTCTCAC CCGCCTGGAG
GAACAGATGA GCGCCGATGA ATGGTCGACT GCACCGGTAG TGCTGGTGGA ACAGGGTCGA
GTGGCGATTG GCGATGAAAT CGGCCAGTTG CTGGGCGCGA AAATGGTCGT GATGCTGATT
GGAGAGCGTC CGGGCCTCAG TTCACCGGAC AGCCTGGGTT TATATTTCAC CTACAATCCA
AAGGTCGGCC TCACGGATGC TTACCGCAAC TGCATCTCCA ATGTGCGGCT GGAAGGGCTC
AGCTATGGCA TGGCGGCGCA TCGCTTGCTG TATCTGATGC GCGAAGCCTG TCGGCGCCAG
CTGTCGGGCG TCAATCTGAA GGACGAAGCG CAGGTTCAGA CGCTGGAATC GGAAGCCGGT
ACAGACATGA AGAGTAATTT CCTACTCGAT CCGCCCCCAG CCTGA
 
Protein sequence
MEKPPVDPQN PWLELRRLTP ARIALGRTGT SLPTRAQLDF QYAHAQARDA VHLPFDHAAL 
SAQLNERQRE SLLLHSAAVD RNSYLQRPDL GRKLSDQSAQ TLREYAQAHP GGVDLVIVVA
DGLSALAVHR HTLPFLTRLE EQMSADEWST APVVLVEQGR VAIGDEIGQL LGAKMVVMLI
GERPGLSSPD SLGLYFTYNP KVGLTDAYRN CISNVRLEGL SYGMAAHRLL YLMREACRRQ
LSGVNLKDEA QVQTLESEAG TDMKSNFLLD PPPA