Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4945 |
Symbol | |
ID | 3714028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5573405 |
End bp | 5574202 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | phosphomethylpyrimidine kinase |
Protein accession | YP_350673 |
Protein GI | 77461166 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.505455 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATCT ACAGCTCACG CCCCGTTGTC CTCTGTCTCT CCGGCCACGA CCCCAGTGGT GGCGCCGGCT TGCAGGCAGA TATCGAAGCC CTGCTCGCTC AGGGTTGCCA TGCGGCTCCG GCCGTCACCG CCCTGACCGT GCAAGACACC GTCAACGTCA CTGACTTTCG CGTCCTCGAC CGTGAGTGGG TACTGGCCCA GGCCAATGCC GTGCTCAACG ACTCCGAAGT CGCGGCAGTG AAACTGGGCA TGCTCGGTTC CCTGGAAATG GTCGACACCG TCGTCGAACT GCTTCAGGCG CACCCGCACT TGCCAGTGGT CTGCGACCCG GTGCTGCGTG CCGGCGGCGG CGGACGCCTG GGCAAGGACG AAGTCGGCTA CGCCATGCGC GAACGCCTGC TGCCGCTGTC GATCATCGCC ACCCCCAACC TTCCCGAAGC CCGGATCCTT GCCGAACTGC CGGAAGGCAC CGCGGACGAG TGCGCTGAAA AACTCCTGCC GTTCATCAAG AACCTGCTGA TCACTGGCGG TCACGGCGAC GAAAGCGAAA TCCATAACCG CCTGTACAGC CGCGACGGCC TGCGCGAAAC CTTCAAGTGC CAGCGCTTGC CGGGCAGCTA TCACGGCTCC GGTTGCACCC TGGCCAGCAC GCTTGCCGGC CGCCTGGCAC TGGGCGAAAA CCTTGCCAGC GCCGTACGCA CGGCACTGGA TTACACCTGG CGCACCCTGC GCGATGCCGA ACAGCTGGGC AAAGGCCAGT TCGTGCCGCG TCGCCTGCCG CTGGATTTCT GTTCCTGA
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Protein sequence | MNIYSSRPVV LCLSGHDPSG GAGLQADIEA LLAQGCHAAP AVTALTVQDT VNVTDFRVLD REWVLAQANA VLNDSEVAAV KLGMLGSLEM VDTVVELLQA HPHLPVVCDP VLRAGGGGRL GKDEVGYAMR ERLLPLSIIA TPNLPEARIL AELPEGTADE CAEKLLPFIK NLLITGGHGD ESEIHNRLYS RDGLRETFKC QRLPGSYHGS GCTLASTLAG RLALGENLAS AVRTALDYTW RTLRDAEQLG KGQFVPRRLP LDFCS
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