Gene Pfl01_4918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4918 
Symbol 
ID3714040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5540845 
End bp5541765 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content64% 
IMG OID 
Producthistone deacetylase superfamily protein 
Protein accessionYP_350646 
Protein GI77461139 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000273279 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTGC CGTTGATCTA CCACGAAGAC TACAGCCCCG AGTTTCCGGC GGATCACCGC 
TTTCCCATGG ACAAGTTCCG CCTGCTGCGC GATCACCTGG TGGACAGCGG CCTGACCCGC
GACGAAGACC TGCTGCGCCC TGAACTGTGC CCTGCCGACA TTCTCGCCCT GGCCCATGAC
CGCAGTTATA TCGAGCGCTA CATGAGTGGC GAGTTGTCCC GCGAAGACCA GCGGCGCCTC
GGTCTGCCGT GGAACGAAGC GCTGGCGCGA CGCACGGTGC GGGCGGTCGG CGGTTCGATT
CTGGCAGCGG AAAAAGCCCT GGAACATGGC CTGGCCTGTC ACCTCGCCGG CGGCACCCAT
CACGCCCACT ACGACTACCC CGCCGGGTTC TGCATCTTCA ATGACCTGGC GATCATCAGC
CACTACCTGC TGCAAAGCGG CCGGGTGAAC CGGGTGCTGA TCTTCGACTG CGACGTGCAT
CAGGGCGACG GCACTGCACG AATTCTGCAC AACACCCCGG AAGCGATCAC CGTTTCCCTG
CACTGCGAGA AGAACTTTCC TGCACGCAAG GCCGAAAGCG ACTGGGACAT TCCGCTGCCC
AACGGCATGG GCGACGCCGA CTACTTGAAG GTTGTCGATG ACGCGCTCAA CTATCTGCTG
CCGCTGTATC AGCCGGATCT GGTGCTGTAC GACGCCGGCG TCGACGTGCA CAAGGACGAC
GCCCTCGGTT ATCTGCAACT GACCGACGAA GGCGTCGCCG CCCGCGATGA AAGCGTGATG
CGCCACTGCC TGGGCCGCGA CATCCCGGTG GTCGGGGTGA TCGGCGGTGG TTACAGCAAG
GATCGCCACG CCCTCGCCCG CCGTCACGGG ATCCTGCATC ACAGTGCGCA GCGCGTCTGG
CAGTCATCGG GTTGTCATTG A
 
Protein sequence
MPLPLIYHED YSPEFPADHR FPMDKFRLLR DHLVDSGLTR DEDLLRPELC PADILALAHD 
RSYIERYMSG ELSREDQRRL GLPWNEALAR RTVRAVGGSI LAAEKALEHG LACHLAGGTH
HAHYDYPAGF CIFNDLAIIS HYLLQSGRVN RVLIFDCDVH QGDGTARILH NTPEAITVSL
HCEKNFPARK AESDWDIPLP NGMGDADYLK VVDDALNYLL PLYQPDLVLY DAGVDVHKDD
ALGYLQLTDE GVAARDESVM RHCLGRDIPV VGVIGGGYSK DRHALARRHG ILHHSAQRVW
QSSGCH