Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4918 |
Symbol | |
ID | 3714040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5540845 |
End bp | 5541765 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | histone deacetylase superfamily protein |
Protein accession | YP_350646 |
Protein GI | 77461139 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000000273279 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATTGC CGTTGATCTA CCACGAAGAC TACAGCCCCG AGTTTCCGGC GGATCACCGC TTTCCCATGG ACAAGTTCCG CCTGCTGCGC GATCACCTGG TGGACAGCGG CCTGACCCGC GACGAAGACC TGCTGCGCCC TGAACTGTGC CCTGCCGACA TTCTCGCCCT GGCCCATGAC CGCAGTTATA TCGAGCGCTA CATGAGTGGC GAGTTGTCCC GCGAAGACCA GCGGCGCCTC GGTCTGCCGT GGAACGAAGC GCTGGCGCGA CGCACGGTGC GGGCGGTCGG CGGTTCGATT CTGGCAGCGG AAAAAGCCCT GGAACATGGC CTGGCCTGTC ACCTCGCCGG CGGCACCCAT CACGCCCACT ACGACTACCC CGCCGGGTTC TGCATCTTCA ATGACCTGGC GATCATCAGC CACTACCTGC TGCAAAGCGG CCGGGTGAAC CGGGTGCTGA TCTTCGACTG CGACGTGCAT CAGGGCGACG GCACTGCACG AATTCTGCAC AACACCCCGG AAGCGATCAC CGTTTCCCTG CACTGCGAGA AGAACTTTCC TGCACGCAAG GCCGAAAGCG ACTGGGACAT TCCGCTGCCC AACGGCATGG GCGACGCCGA CTACTTGAAG GTTGTCGATG ACGCGCTCAA CTATCTGCTG CCGCTGTATC AGCCGGATCT GGTGCTGTAC GACGCCGGCG TCGACGTGCA CAAGGACGAC GCCCTCGGTT ATCTGCAACT GACCGACGAA GGCGTCGCCG CCCGCGATGA AAGCGTGATG CGCCACTGCC TGGGCCGCGA CATCCCGGTG GTCGGGGTGA TCGGCGGTGG TTACAGCAAG GATCGCCACG CCCTCGCCCG CCGTCACGGG ATCCTGCATC ACAGTGCGCA GCGCGTCTGG CAGTCATCGG GTTGTCATTG A
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Protein sequence | MPLPLIYHED YSPEFPADHR FPMDKFRLLR DHLVDSGLTR DEDLLRPELC PADILALAHD RSYIERYMSG ELSREDQRRL GLPWNEALAR RTVRAVGGSI LAAEKALEHG LACHLAGGTH HAHYDYPAGF CIFNDLAIIS HYLLQSGRVN RVLIFDCDVH QGDGTARILH NTPEAITVSL HCEKNFPARK AESDWDIPLP NGMGDADYLK VVDDALNYLL PLYQPDLVLY DAGVDVHKDD ALGYLQLTDE GVAARDESVM RHCLGRDIPV VGVIGGGYSK DRHALARRHG ILHHSAQRVW QSSGCH
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