| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4901 |
|---|
| Symbol | |
|---|
| ID | 3714141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 5524373 |
|---|
| End bp | 5525284 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_350629 |
|---|
| Protein GI | 77461122 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.795056 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAGAC ACTTCGACGA TCTTCAGCTG GGCAGCATCG AGCTGTTTTG CCTGGCCGCC
GAGTGCGGCA GTTTCACCGG CGCGGCGCAG GCGGCTTCGG TGACGCCGGC AGCGGTGAGC
CGCTCGGTAT CCCGCATGGA GGAACGCCTG GGCGTGCGGC TGTTCGCGCG TACCACCCGC
AGCGTGAAAC TGACCGACAG CGGCCGGCGC TATTACGAAG AATGCAGTCA GGCGCTGGCA
CAACTGGTCG AGGCGCAGCG GGAAGTCATG GGCCAGCAGC AGGAACCGTC CGGCACCCTG
CGTATCAGTA TTCCTACGAC CTACGCCCAT CACCGAATCC TGCCGCTGCT GCCGGCCTTT
CGCGCGCGCT TCCCGCAGGT GAAGGTGGAC ATGCACATCA GCAACCGCAA CATCGACTTC
GTCGGCGAGG GCTACGACAT GGCGATCCGC GTGCGGGCGA TTCCCGATTC CGGCCTGATC
GCCCGCCACT TGGAAGATGC GGCGCTGGTG ATGGTTGCCA GCCCCGATTA CCTCAAACGC
GCCGGCACGC CGCAGACCCT CGAAGACCTC GAACAGCACG AGTGCATCCA GTACGAATTA
CCCAGCAACG GGCGGCGGAT CACCTGGCTG TTTTACGACG AAGAGACGCC ACGGGAAATC
CTCGCCGAGG GCAATTTCTG CTGCTCGGAC GATGTGCTCG GTGGCGTGAC CCTGGCCAGG
CACGGTGCCG GATTGTTCCA GACCTATCGC TTCATTGTCG AAAAAGAACT GGCCGACGGC
TCGCTGATAG AAGTGCTCAA ACCCTACAGC GGACGCTCGC GGCCGTTCAC CTTGTTGTAC
CCGCAGAATC GCCACATGCC GCTGCGTGTC AGGGCTTTCA TCGATTTTCT GGTGGAGCAG
TTGCCGCACT GA
|
|---|
| Protein sequence | MQRHFDDLQL GSIELFCLAA ECGSFTGAAQ AASVTPAAVS RSVSRMEERL GVRLFARTTR
SVKLTDSGRR YYEECSQALA QLVEAQREVM GQQQEPSGTL RISIPTTYAH HRILPLLPAF
RARFPQVKVD MHISNRNIDF VGEGYDMAIR VRAIPDSGLI ARHLEDAALV MVASPDYLKR
AGTPQTLEDL EQHECIQYEL PSNGRRITWL FYDEETPREI LAEGNFCCSD DVLGGVTLAR
HGAGLFQTYR FIVEKELADG SLIEVLKPYS GRSRPFTLLY PQNRHMPLRV RAFIDFLVEQ
LPH
|
|---|
| |