| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4820 |
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| Symbol | |
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| ID | 3717256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 5439714 |
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| End bp | 5441414 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | |
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| Product | type II secretion system protein E |
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| Protein accession | YP_350548 |
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| Protein GI | 77461041 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.25811 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGACA TCGCTCTGAG CGGTCTGGCC AAGCAATTGG TACAGGCCGA ACTGCTCACG
GAAAAAAGCG CCCAGCACGC CTGGCAGCAG GCCCAGCGCA ATCGCCTGTC GCTGGTCAGC
TATCTGGTAC AAAACAAACT GGTGAAGAGC GCGCAGGTCG CCGAGATTGC CTCGGAGCAC
TTCGGCATGG CGTTCCTCGA CCTCAACTGT CTCGACAGGG AAACCCAGCC CAAGGGTCTG
GTCAGTGAAA AACTGGTGCG CCAGCACCAT GCCCTGCCCC TGTGGCGTCG CGGCAACAAG
CTGTTCGTGG GGATCTCCGA CCCGAGCAAT CATCAGGCGA TCAACGACAT CCAGTTCAGC
ACCGGGCTGA GCACCGAAGC CATTCTGGTC GAGGACGACA AGCTCACCGA CGCCATCGAG
AAATTCTTCG ACACCCACGC CTCCGGCCTG GAAGACATGG CCGATGTCGA CCTCGACGGG
CTGGACGTCG AGTCCATCGA TGACAGCAAG CAGGACGCCA TCGGCGGGCT CGATGCCGAC
GATGCGCCGG TGGTGCGCTT CGTGCACAAG ATGCTGCTGG ACGCAATCAA GAGCGGCTCT
TCCGACCTGC ACTTCGAGCC TTACGAGAAA AACTACCGGG TGCGGGTGCG CACCGACGGC
ATCCTGCGCG AAGTGGCCAA GCCACCGATT CAATTGGCAG GACGCATCGC CGCACGCCTG
AAGGTGATGG CCAGCCTCGA CATCTCGGAG CGCCGCAAAC CTCAGGACGG GCGCCTGAAG
ATGCGCCTGT CAAAGACCAA ATCGATCGAT TTCCGGGTCA ACACCCTGCC AACCCTGTGG
GGCGAAAAAG TGGTGATCCG GATCCTCGAC CCCTCCAGCG CGCAGATCGG CATCGACGCC
CTCGGTTATG AGCCGGAGCA GAAAGATCTG TACATGGCCG CCCTGAAACA GCCGCAAGGA
ATGATTCTGG TCACCGGCCC CACCGGTTCG GGCAAGACCG TTTCGCTGTA CACCGGGCTG
AATATCCTCA ATACCGTCGA CATCAACATC TCTACCGCTG AAGACCCGGT GGAGATCAAC
ATGGAAGGCA TCAACCAGGT CAACGTCAAT CCGCGCCAAG GGATGGACTT TGCCCAGGCC
CTGCGCTCGT TCCTGCGTCA GGATCCGGAC GTGATCATGG TCGGCGAGAT CCGTGACCTC
GAGACCGCCG AGATCGCCAT CAAAGCAGCG CAGACCGGTC ACCTCGTGCT CTCCACGCTG
CACACCAACA GCGCCGCCGA GACACTCACC CGCTTGCACA ACATGGGCAT TCCCGGCTTC
AACATCGCCA CGTCGGTGAG CCTGATCATC GCCCAGCGTC TGGCGCGAAA ACTCTGCAGC
CAATGCAAGA AAGCCATCGA GATTCCCCGC GAAACCTTGC TCAAGGAAGG CTTCCCCGAG
GAACGCATCG GCAGTTTCAC AATCTATGAG CCCGTCGGCT GCGATCACTG CAACGGCGGG
TACAAGGGTC GCGTGGGGAT TTATGAAGTG GTGAAGAACA CTCCCGAGTT GCAACGGCTG
ATCATGGCCG AGGGCAACTC ACTGGAAATC GATACCCGGA TGCGCCGGGA CGGCTTCAAC
GACCTGCGCA CCTCGGGCCT GATCAAAGCC ATGCAAGGCA TCACCAGCCT TGAAGAAATC
AACCGGGTCA CCAAGGACTG A
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| Protein sequence | MNDIALSGLA KQLVQAELLT EKSAQHAWQQ AQRNRLSLVS YLVQNKLVKS AQVAEIASEH
FGMAFLDLNC LDRETQPKGL VSEKLVRQHH ALPLWRRGNK LFVGISDPSN HQAINDIQFS
TGLSTEAILV EDDKLTDAIE KFFDTHASGL EDMADVDLDG LDVESIDDSK QDAIGGLDAD
DAPVVRFVHK MLLDAIKSGS SDLHFEPYEK NYRVRVRTDG ILREVAKPPI QLAGRIAARL
KVMASLDISE RRKPQDGRLK MRLSKTKSID FRVNTLPTLW GEKVVIRILD PSSAQIGIDA
LGYEPEQKDL YMAALKQPQG MILVTGPTGS GKTVSLYTGL NILNTVDINI STAEDPVEIN
MEGINQVNVN PRQGMDFAQA LRSFLRQDPD VIMVGEIRDL ETAEIAIKAA QTGHLVLSTL
HTNSAAETLT RLHNMGIPGF NIATSVSLII AQRLARKLCS QCKKAIEIPR ETLLKEGFPE
ERIGSFTIYE PVGCDHCNGG YKGRVGIYEV VKNTPELQRL IMAEGNSLEI DTRMRRDGFN
DLRTSGLIKA MQGITSLEEI NRVTKD
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