Gene Pfl01_4783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4783 
Symbol 
ID3716409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5398828 
End bp5399451 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content54% 
IMG OID 
Productputative sulfite oxidase subunit YedZ 
Protein accessionYP_350511 
Protein GI77461004 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000214193 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0081736 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGATATC CGATCTGGCG CGTAGGTGTT TTCCTGGCTG CGGCGATCTG GCCGCTGTTG 
TGGTTCTATC AGGCCTTTGC GGATCTGCTT GGGCCTGATC CCGGGAAAGT CCTGGTTGAT
CGGCTGGGAC TTGGGACATT GGTGTTGCTG TTGATCACCC TGAGTATGAC GCCGCTGCAG
AAAATTACCG GCTGGGCCGG GTGGATTGCT GTGCGTCGGC AGTTGGGGCT CTGGTGTTTC
GCCTATGTGG TTCTGCATCT TTGCAGCTAT ATGGCGTTCA TCCTCGGTTT TGACTGGTCG
CAACTGGGTG TCGAGTTACG TAAGCGTCCA TACATTATTG TGGGTGCTCT GGGTTTTCTG
GGGCTACTGG CATTGGCGGT TACCTCCAAC CGATATAGTC AGCGTCGTTT GGGTACGCGC
TGGAAAAGGT TGCACCGGCT GGTGTACGTG ATTCTGGGGT TGGGACTGCT GCATATGTTG
TGGATTGTGC GTGCTGATCT TAAGGAGTGG GCAATCTATG CCTTTGTAGG TGTTTTCCTT
TTGGCGCTGC GTATTCCTCC CTTGACCCGC CGGATCCCGC GTTTGATGGG TAAAAAGCAG
GTTTTTCAGG AAAAGCGAAA TTAA
 
Protein sequence
MRYPIWRVGV FLAAAIWPLL WFYQAFADLL GPDPGKVLVD RLGLGTLVLL LITLSMTPLQ 
KITGWAGWIA VRRQLGLWCF AYVVLHLCSY MAFILGFDWS QLGVELRKRP YIIVGALGFL
GLLALAVTSN RYSQRRLGTR WKRLHRLVYV ILGLGLLHML WIVRADLKEW AIYAFVGVFL
LALRIPPLTR RIPRLMGKKQ VFQEKRN