Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4783 |
Symbol | |
ID | 3716409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5398828 |
End bp | 5399451 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | putative sulfite oxidase subunit YedZ |
Protein accession | YP_350511 |
Protein GI | 77461004 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000214193 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0081736 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGATATC CGATCTGGCG CGTAGGTGTT TTCCTGGCTG CGGCGATCTG GCCGCTGTTG TGGTTCTATC AGGCCTTTGC GGATCTGCTT GGGCCTGATC CCGGGAAAGT CCTGGTTGAT CGGCTGGGAC TTGGGACATT GGTGTTGCTG TTGATCACCC TGAGTATGAC GCCGCTGCAG AAAATTACCG GCTGGGCCGG GTGGATTGCT GTGCGTCGGC AGTTGGGGCT CTGGTGTTTC GCCTATGTGG TTCTGCATCT TTGCAGCTAT ATGGCGTTCA TCCTCGGTTT TGACTGGTCG CAACTGGGTG TCGAGTTACG TAAGCGTCCA TACATTATTG TGGGTGCTCT GGGTTTTCTG GGGCTACTGG CATTGGCGGT TACCTCCAAC CGATATAGTC AGCGTCGTTT GGGTACGCGC TGGAAAAGGT TGCACCGGCT GGTGTACGTG ATTCTGGGGT TGGGACTGCT GCATATGTTG TGGATTGTGC GTGCTGATCT TAAGGAGTGG GCAATCTATG CCTTTGTAGG TGTTTTCCTT TTGGCGCTGC GTATTCCTCC CTTGACCCGC CGGATCCCGC GTTTGATGGG TAAAAAGCAG GTTTTTCAGG AAAAGCGAAA TTAA
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Protein sequence | MRYPIWRVGV FLAAAIWPLL WFYQAFADLL GPDPGKVLVD RLGLGTLVLL LITLSMTPLQ KITGWAGWIA VRRQLGLWCF AYVVLHLCSY MAFILGFDWS QLGVELRKRP YIIVGALGFL GLLALAVTSN RYSQRRLGTR WKRLHRLVYV ILGLGLLHML WIVRADLKEW AIYAFVGVFL LALRIPPLTR RIPRLMGKKQ VFQEKRN
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