Gene Pfl01_4739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4739 
Symbol 
ID3715160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5343937 
End bp5345184 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content61% 
IMG OID 
Productamine oxidase 
Protein accessionYP_350467 
Protein GI77460960 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.290105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCG CCATTATCGG CAGTGGCATC GCAGGATTGA CCTGCGCATA CCTGCTTGCT 
CGCCGACATG ACATCACCGT GTTCGAAGCC GACGCCCGGG TCGGCGGTCA TACGCACACG
GTGCCGGTCA CCGTGGACGG GCGCGAGTAT GCGGTGGACA CCGGGTTCAT TGTGTTCAAC
GACTGGACGT ATCCGAACTT TATTCGTTTG CTCGGCCAGT TGGGCGTGGC CTTCAAGCCC
ACCGAGATGA GTTTTTCGGT CAACGATCCG GACACTGGCC TGGAATACAA CGGCAACAAC
CTCAACAGCC TGTTCGCCCA ACGCAGCAAT CTGCTGTCCC CCGGATTCTG GGGCATGTTG
CGCGACATCC TGCGATTCAA TAAAGAAGCC CGGCGCGACC TTGCCGAACA GCGGATCACC
GCGGACACCA CACTCGACGA TTACCTCAAG GCCGGCGCTT ACGGCGAGCG CTTCATCCTG
CATTACATCG TGCCGATGGG CGCGGCGATC TGGTCGATGC CGATGGCCGA AATGCTCAAT
TTTCCGTTGC AGTTCTTCGT GCGTTTTTTT GAGAACCACG GGTTGCTGTC GGTCAGCAAC
CGTCCGCAAT GGCAGGTCAT CGAGGGGGGT TCCAGCGCTT ACATTGCGCC GTTGACCGCA
TCGTTCAAGG AGCGTATCCG CCTGAGTTGC CCGGTGGGCC GGATCGATCG CGATGCGCAC
GGCGTGGTTA TCCACAGCCC TGCCGGCATC GAACGTTTCG ACAAAGTGGT GCTGGCCTGC
CACAGCGACC AGGCCCTGCG ACTGCTGGGA AGTCCTGACG ATAAAGAAAG GGAAATCCTC
GGCGCCCTGC CCTACGCCGA CAACGAAGTG CTGCTGCACA CCGACACCCG TCTGCTGCCC
ACGCGCAAGC GGGCCTGGGC CAGCTGGAAC TATCGCCTCG GCGGAGCCGG TCATACCCGG
GCGGCCGTGA CCTACGACAT GAACATTCTG CAAGGCATCC AGAGCGACAC CACGTTCTGC
GTCAGCCTCA ATCAGAGCGC TGGCATCACA CCATCCAAAG TGCTGGCGCG CTTTACCTAT
GCCCACCCGC AATTCAGCCT CGCGGCCGTG GCGGCACAGC AGCGCTGGGC TGAAATCGAC
GGCGCGCAAC ACACGCATTA TTGCGGCGCC TATTGGGCCA ACGGTTTTCA TGAGGACGGC
GTGGTCAGCG CCCTGCGCGT GGCCGCAGCC TTCGGAGAAA GTCTGTGA
 
Protein sequence
MKIAIIGSGI AGLTCAYLLA RRHDITVFEA DARVGGHTHT VPVTVDGREY AVDTGFIVFN 
DWTYPNFIRL LGQLGVAFKP TEMSFSVNDP DTGLEYNGNN LNSLFAQRSN LLSPGFWGML
RDILRFNKEA RRDLAEQRIT ADTTLDDYLK AGAYGERFIL HYIVPMGAAI WSMPMAEMLN
FPLQFFVRFF ENHGLLSVSN RPQWQVIEGG SSAYIAPLTA SFKERIRLSC PVGRIDRDAH
GVVIHSPAGI ERFDKVVLAC HSDQALRLLG SPDDKEREIL GALPYADNEV LLHTDTRLLP
TRKRAWASWN YRLGGAGHTR AAVTYDMNIL QGIQSDTTFC VSLNQSAGIT PSKVLARFTY
AHPQFSLAAV AAQQRWAEID GAQHTHYCGA YWANGFHEDG VVSALRVAAA FGESL