Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4739 |
Symbol | |
ID | 3715160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5343937 |
End bp | 5345184 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | amine oxidase |
Protein accession | YP_350467 |
Protein GI | 77460960 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.290105 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATCG CCATTATCGG CAGTGGCATC GCAGGATTGA CCTGCGCATA CCTGCTTGCT CGCCGACATG ACATCACCGT GTTCGAAGCC GACGCCCGGG TCGGCGGTCA TACGCACACG GTGCCGGTCA CCGTGGACGG GCGCGAGTAT GCGGTGGACA CCGGGTTCAT TGTGTTCAAC GACTGGACGT ATCCGAACTT TATTCGTTTG CTCGGCCAGT TGGGCGTGGC CTTCAAGCCC ACCGAGATGA GTTTTTCGGT CAACGATCCG GACACTGGCC TGGAATACAA CGGCAACAAC CTCAACAGCC TGTTCGCCCA ACGCAGCAAT CTGCTGTCCC CCGGATTCTG GGGCATGTTG CGCGACATCC TGCGATTCAA TAAAGAAGCC CGGCGCGACC TTGCCGAACA GCGGATCACC GCGGACACCA CACTCGACGA TTACCTCAAG GCCGGCGCTT ACGGCGAGCG CTTCATCCTG CATTACATCG TGCCGATGGG CGCGGCGATC TGGTCGATGC CGATGGCCGA AATGCTCAAT TTTCCGTTGC AGTTCTTCGT GCGTTTTTTT GAGAACCACG GGTTGCTGTC GGTCAGCAAC CGTCCGCAAT GGCAGGTCAT CGAGGGGGGT TCCAGCGCTT ACATTGCGCC GTTGACCGCA TCGTTCAAGG AGCGTATCCG CCTGAGTTGC CCGGTGGGCC GGATCGATCG CGATGCGCAC GGCGTGGTTA TCCACAGCCC TGCCGGCATC GAACGTTTCG ACAAAGTGGT GCTGGCCTGC CACAGCGACC AGGCCCTGCG ACTGCTGGGA AGTCCTGACG ATAAAGAAAG GGAAATCCTC GGCGCCCTGC CCTACGCCGA CAACGAAGTG CTGCTGCACA CCGACACCCG TCTGCTGCCC ACGCGCAAGC GGGCCTGGGC CAGCTGGAAC TATCGCCTCG GCGGAGCCGG TCATACCCGG GCGGCCGTGA CCTACGACAT GAACATTCTG CAAGGCATCC AGAGCGACAC CACGTTCTGC GTCAGCCTCA ATCAGAGCGC TGGCATCACA CCATCCAAAG TGCTGGCGCG CTTTACCTAT GCCCACCCGC AATTCAGCCT CGCGGCCGTG GCGGCACAGC AGCGCTGGGC TGAAATCGAC GGCGCGCAAC ACACGCATTA TTGCGGCGCC TATTGGGCCA ACGGTTTTCA TGAGGACGGC GTGGTCAGCG CCCTGCGCGT GGCCGCAGCC TTCGGAGAAA GTCTGTGA
|
Protein sequence | MKIAIIGSGI AGLTCAYLLA RRHDITVFEA DARVGGHTHT VPVTVDGREY AVDTGFIVFN DWTYPNFIRL LGQLGVAFKP TEMSFSVNDP DTGLEYNGNN LNSLFAQRSN LLSPGFWGML RDILRFNKEA RRDLAEQRIT ADTTLDDYLK AGAYGERFIL HYIVPMGAAI WSMPMAEMLN FPLQFFVRFF ENHGLLSVSN RPQWQVIEGG SSAYIAPLTA SFKERIRLSC PVGRIDRDAH GVVIHSPAGI ERFDKVVLAC HSDQALRLLG SPDDKEREIL GALPYADNEV LLHTDTRLLP TRKRAWASWN YRLGGAGHTR AAVTYDMNIL QGIQSDTTFC VSLNQSAGIT PSKVLARFTY AHPQFSLAAV AAQQRWAEID GAQHTHYCGA YWANGFHEDG VVSALRVAAA FGESL
|
| |