Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4594 |
Symbol | |
ID | 3713593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5194022 |
End bp | 5195701 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | 2-isopropylmalate synthase |
Protein accession | YP_350322 |
Protein GI | 77460815 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATGC TCAAAGACCC GTCTTCGAAA TACCGTGCGT TTCCAGTGAT CAACCTGCCG GATCGCACCT GGCCGTCGAA AACCATCGAT GCCGCGCCAA TCTGGTGCAG CTCCGACCTG CGTGACGGCA ACCAGTCGTT GATCGAGCCA ATGGACGCGG TGAAAAAGCT GCGCTTCTGG AAAACCCTGG TGCAAGTGGG CGTGAAGGAA ATCGAAGCGT CGTTCCCGGC CGCTTCGCAA ACCGACTTCG ACTTCGTGCG TACCCTGATC GAGGACGGCC ACATCCCGGA CGACACCACC ATTCAGGTGC TGACCCAGGG CCGTGAAGAC CTGATCGAGC GCACCTTCGA ATCCCTGCGC GGGGCGAAGA AAGCCATCGT TCATCTGTAC AACGCCACCT CCCCTTCTTT CCGTCGCATC GTTTTCAACC AGGACAAGGA CGGGATCAAG GCCATCGCCG TGAACGCCGC CAAGCTGTTC GTCAAATACG CGGCCATGCA GCCGGACACC GAGTGGACCT TCGAGTACTC GCCGGAAACC TTCAGCGCCA CCGAACTGGA ATTCGCCAAG GAAGTCTGTG ACGCGGTGAT CGAGGTCTGG AACCCGACGC CTGAGCACAA GATCATCCTC AACCTGCCGG CCACCGTTGA ATGTGCGACC CCGAACGTCT ACGCCGACCA GATCGAGTGG TTCCACCGCA ACATCAACCG CCGTGACAGC GTGATCATCA GCCTGCACAC CCACAACGAC CGCGGCACTG GCGTGGCCGC CACCGAGCTG GGCCTGATGG CCGGCGCCGA TCGCGTCGAA GGCTGCCTGT TCGGCAACGG CGAGCGTACC GGTAACGTCG ACCTCGTGAC TGTGGCACTG AACATGTACA CCCAGGGCAT CAATCCTGAC CTGGACTTTT CCGACATCGA CGGCGTGCGC AAAGTCGTCG AAGAGTGCAA CCAGATCCAG GTTCACCCGC GTCACCCGTA CGTCGGCGAC CTGGTGCACA CAGCGTTCTC CGGCTCCCAC CAGGACGCGA TCCGCAAGGG CTTCGCCCAG CAGAAACCGG ACACCCTGTG GGAAGTGCCG TACCTGCCGA TCGACCCGGC CGACATCGGC CGCAGCTACG AGGCGGTGAT CCGCGTCAAC AGCCAGTCGG GCAAGGGCGG CATCGCCTAC CTGCTGGAGC AGGAATACGG CATCAGCCTG CCACGTCGCA TGCAGATCGA ATTCAGCCAG GTCGTGCAGC GTGAAACCGA TCGCCTGGGC CTGGAGATGA CCGCGCAGCA AATCCACGCG CTGCTGCACA GCGAATATCT GCAAGCCAAC ACCCCGTACG CGCTGGTCAG CCATCGCCTG CAGGAAGAAA ACGGTAACAG CGCCGTCGAA GTGGAAGTGG CGAGCAAAGG TCAGGGCGAA ACCAATCTGC ACTGGCGCGG CAAGGGCAAC GGCGCGCTGG AAGCCCTGGT GGCCGGTCTG CCGATTCCGG TGGAAATCAT GGACTACAAC GAACACGCCA TCGGCGCGGG CACTAACGCC AAGGCGGCAG CCTACATCGA GCTGCGTGTG AACGGCGAAC GTGCGGTGCA CGGCGTGGGC ATCGATGAAA ACATCACCAC CGCCAGCTTC AAGGCACTGT TCAGCGCGCT GAACCGCTCG CTGAGCCAGC CGGAAGCGAA AGCGGCGTAA
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Protein sequence | MSMLKDPSSK YRAFPVINLP DRTWPSKTID AAPIWCSSDL RDGNQSLIEP MDAVKKLRFW KTLVQVGVKE IEASFPAASQ TDFDFVRTLI EDGHIPDDTT IQVLTQGRED LIERTFESLR GAKKAIVHLY NATSPSFRRI VFNQDKDGIK AIAVNAAKLF VKYAAMQPDT EWTFEYSPET FSATELEFAK EVCDAVIEVW NPTPEHKIIL NLPATVECAT PNVYADQIEW FHRNINRRDS VIISLHTHND RGTGVAATEL GLMAGADRVE GCLFGNGERT GNVDLVTVAL NMYTQGINPD LDFSDIDGVR KVVEECNQIQ VHPRHPYVGD LVHTAFSGSH QDAIRKGFAQ QKPDTLWEVP YLPIDPADIG RSYEAVIRVN SQSGKGGIAY LLEQEYGISL PRRMQIEFSQ VVQRETDRLG LEMTAQQIHA LLHSEYLQAN TPYALVSHRL QEENGNSAVE VEVASKGQGE TNLHWRGKGN GALEALVAGL PIPVEIMDYN EHAIGAGTNA KAAAYIELRV NGERAVHGVG IDENITTASF KALFSALNRS LSQPEAKAA
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