Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4564 |
Symbol | |
ID | 3713525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5151354 |
End bp | 5154443 |
Gene Length | 3090 bp |
Protein Length | 1029 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_350292 |
Protein GI | 77460785 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTTCCGA CTGAACGTGT GGATGAAGCG CCTGTACCTG AGAAACCCCG TCGCAACCGG CATGGGTGGA AGGCTTTCTG GCTCCTGTTG GTGATCATCG CGATTGTCGT GGGCCTGGCC GCGATGAAGG AAATGCGCAC CTCGCGTTTT CAGTCCCGCG AGGTCAGCCA GTACGCCGCC AAACTCAAGT ACGAATTGCA ACCGGGGCCC AGCGAAGCGA TCCGCTATCC GGGCAACGGG CCGTTCGATC TGCGTCTGGG CTACAGCTCG CTGGACGAGT TCCTGCCGCG GCTGATCAAG CGCAACTACG TGATCACCGA GCAGACGCGC TTCTCCCCGG CCCTGCTCAA CTACACCGAC AAGGGCCTGT TCGTGCCCTA TTCCGAAAAG ATCCAGGCCG GGCTGTCGAT CACCGATTGC CGCGCCGCGC CGCTGTATCA GTACAACTAT CCGCAGCAGC TGTACGCGAG TTTCGATTCG ATCCCGCCGG TGGTGGTCAA CAGCCTGCTG TTCATCGAAA ACCGTTTTCT ACTTGATCCA AAACAACCGA TGGCCAACCC GGCGGTGGAC TGGCCGCGCT TCGGCATGGC CGCGTGGTCG CAAGTTGCCA AGCTGCTGCA CTTGCCGGGG CAGTCGGCCG GTGGCAGTAC CCTGGCCACG CAACTGGAGA AATACCGCCA TTCACCCGAT GGCCTGACGG TGTCCGGCGC GGAGAAAATC CGCCAGATGA TTTCCGCCAG CGTGCGCGCC TATCAGGGTG GCCCGGACAC CTTGCCGGCG CGGCAGAACA TCGTTCGCGA TTATCTCAAC AGCGTGCCGC TGTCGGCGGT GCCGGGGCAT GGTGAGGTAC ATGGCATGGC CGAGGGCCTG CGGGTCTGGT ATGGCGCCGA CTTCAACGAG GCCAACCGAA CACTCGCCAG TACCGCCACC GATCCGAAAT CCATGGCGGA CAAGGGCCTG GCCCTGCGCG AGATGCTCTC GCTGATGATC GCCCAGCGCC GCCCTTCGCA TTACCTGACC AAGGGTCGTG AAGAACTGGT CGAACTGACC AACAGCCACT TGCGCCTGCT CAAGCAGAAC GGCGTGATCG ACGCTGCCCT GGCCGATGCC GCGCTGGCCA GCACCATCAG CTACCGCGAC TGGCAGACCC AGCCGACGAT TCAGCCGATC GAAACCAACA AGGGCATCAG TGTCGCCCGC AGCCGGCTGG CGTCGATGCT CAACCGTCCG CTGTACGACC TTGACCGCCT CGACTTGTCC GCTACCAGCA CCCTGCAAGG CGAGCTGCAA ACCCAGGCCA CTGCATACCT GAAACGACTG GCCGACCCGG CCTATGCCGC TGAAATCGGC CTGATGGGCG AACGCCTCCT GACGCCCACC AGCACCACTC AGGTGCGCTA CAGCTTCACA TTGTTCGAGC TGACCCCGGA CGGTTCACGC GTGCGGGTGC AGACCGACAG CACTGATCAG CCGTTCGACA TCAATGAGGG CAGCAAACTG GAACTGGGCT CCACCGCCAA GATGCGGGTG CTCACCACCT ACCTGCAAAT CATCGCGGAG CTGCATGACA AGTACGGCGC CATGAGCGTG CCGGAACTGA AGAAAGTCGA GGTACCGGAT CAGGATCGCC TGAGCCAGTG GGTGATCGAC TACCTGATCC AGAACAAGGA TCACGACCTG TCGAAGATGC TCTCCTCCGC CCTCGACCGC AAATACTCGG CCAGTCCTGG CGAGGCGTTT TTCACCGGTG GCGGCCTGCA TGTGTTCCAT AACTTTCGCA AGGAAGACAA CGGTCGCCTG CCGACGCTGC GCGATGCCCT GCGCGAATCG ATCAACCTGC CGTTCATTCG CCTGATGCGC GATCTGGTGC GCTACACCAC CTACTCAGGT CCCAACAACA GCGCCGAACT GCTCAAGGAC GACCGCGACC CAAGACGTCA GGAATACCTC GCCTCGTTTG CCGACCGAGA GGGCACCTCG TTCCTGCTCA AGTTCTGGAA AAAGTACCGG AACAAGGACA CCCAGGCCCG GCTCGACACC TTCCTCGACA GCATGCGCCC GACCCCGATC CGCATGGCCG CCGTGCACCG TTACCTGCTG CCCAACGCCA GCCAGGAAGA CTTCAACACC TTTGTGCGCT CGCACCTCAA GGGCGTCAAA ATCACCGAAA AACTCACCGA CGAACGCCTG GAACGGCTGT ATCTGGCCTA CGGTCCCGGC ACCTACGACC TACCGGATCA GGGCTTCATC GCTAAGGTTC ACCCGCTGGA CCTGTGGATG ATCGGCTACC TGCTCAACCA CCCCGACGCG ACCTTCAAGG ACATCGTCAA GGCCAGCCAG TTCGAGCGTC AGGAAGTCTA CAGCTGGCTG TTCAAGAGCA GGCACAAGGG TGCCCGTGAC AGTCGCATCC GCACGATGCT GGAGATCGAG GCGTTCCTCG AGATCCATCA GCGCTGGCAG AAAGTCGGCT ATCCGTTCGA TCACCTGGTG CCGTCGCTGG CCACCGCCAT CGGCAGCTCC GGCGACCGCC CCGCGGCGTT GGCCGAACTG ATCGGCACCA TCCTCAACGA CGGTGTGCGC ATGCCGACCC TGCGCATCGA CAGTCTGCAC TTTGCCGCCG GCACGCCTTA CGAAACGAAA CTGGTCAATG ATCCTCACGT CGGCAAACGG GTGATGCCGT CCGAAGTGGC CACGGCGATG CGTGAAGCGC TGTCGCAGGT GGTGGACTCG GGAACGGCCA AACGTGTTTC CGGCAGTTTC AAACTGGCTG ATGGAACACC GCTGACCATG GGTGGAAAAA CCGGTACCGG TGACAACCGG ATCGAGGCCA TCGGCTCCGG CGGGCGAATT CTCAGCTCGA AATCGATCAA CCGCACGGCG ACCTTCGTGT TCTACATCGG CGACCACCAT TTCGGCACGC TCACCGCGTT CGTGCCGGGG CGTTCGGCGG AGAACTTCAA GTTCACCTCG GCCTTGCCGG TACAGGTCCT CAAGGGCATG GCGCCGATTC TGATGCCTTA CCTGCAACCG GGCAGCGACT CACAGTGCCG TGCCACGCAG ACAACGACCG TGGCCCTGGC TTCAGATTGA
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Protein sequence | MVPTERVDEA PVPEKPRRNR HGWKAFWLLL VIIAIVVGLA AMKEMRTSRF QSREVSQYAA KLKYELQPGP SEAIRYPGNG PFDLRLGYSS LDEFLPRLIK RNYVITEQTR FSPALLNYTD KGLFVPYSEK IQAGLSITDC RAAPLYQYNY PQQLYASFDS IPPVVVNSLL FIENRFLLDP KQPMANPAVD WPRFGMAAWS QVAKLLHLPG QSAGGSTLAT QLEKYRHSPD GLTVSGAEKI RQMISASVRA YQGGPDTLPA RQNIVRDYLN SVPLSAVPGH GEVHGMAEGL RVWYGADFNE ANRTLASTAT DPKSMADKGL ALREMLSLMI AQRRPSHYLT KGREELVELT NSHLRLLKQN GVIDAALADA ALASTISYRD WQTQPTIQPI ETNKGISVAR SRLASMLNRP LYDLDRLDLS ATSTLQGELQ TQATAYLKRL ADPAYAAEIG LMGERLLTPT STTQVRYSFT LFELTPDGSR VRVQTDSTDQ PFDINEGSKL ELGSTAKMRV LTTYLQIIAE LHDKYGAMSV PELKKVEVPD QDRLSQWVID YLIQNKDHDL SKMLSSALDR KYSASPGEAF FTGGGLHVFH NFRKEDNGRL PTLRDALRES INLPFIRLMR DLVRYTTYSG PNNSAELLKD DRDPRRQEYL ASFADREGTS FLLKFWKKYR NKDTQARLDT FLDSMRPTPI RMAAVHRYLL PNASQEDFNT FVRSHLKGVK ITEKLTDERL ERLYLAYGPG TYDLPDQGFI AKVHPLDLWM IGYLLNHPDA TFKDIVKASQ FERQEVYSWL FKSRHKGARD SRIRTMLEIE AFLEIHQRWQ KVGYPFDHLV PSLATAIGSS GDRPAALAEL IGTILNDGVR MPTLRIDSLH FAAGTPYETK LVNDPHVGKR VMPSEVATAM REALSQVVDS GTAKRVSGSF KLADGTPLTM GGKTGTGDNR IEAIGSGGRI LSSKSINRTA TFVFYIGDHH FGTLTAFVPG RSAENFKFTS ALPVQVLKGM APILMPYLQP GSDSQCRATQ TTTVALASD
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