| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4552 |
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| Symbol | |
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| ID | 3712590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 5133424 |
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| End bp | 5135298 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_350280 |
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| Protein GI | 77460773 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAC CTTTTCCCCA GACCAACCGG CGCATTCTGA TCGTCGATGA CACCCCGGCG
ATCCATGCCG ACTTTCGCAA GATCCTCACC CCGGACACCC ACGGTGAAGC GGATCTGAAC
ACGCTTGAGC AAACGCTGTT CGGCACCCGC CAATCGCCGC ACCTGACGTT CCAGCTCGAC
TCCGCCTATC AGGGCCAGGA AGCACTGAAA CTGGTGCAAA ACGCACTGGA CGAAGGCCGG
CCCTATGCCC TCGCCTTCAC CGACATGCGC ATGCCGCCCG GTTGGGACGG CCTGGAAACC
ATCGAAAAAC TCTGGGCAGT GGACCCCAAT CTGCAAATTG CGCTGTGCAC CGCCTATTCC
GACTACAGCT GGGAGGCCAT GGCAGAACGG CTGGAGTTCG GCGATCAGTT GCTGATACTG
AAAAAGCCGT TCGACACCCT GGAAATCCGC CAGATGGCCA ATGCCCTGAC GTGGAAATGG
CAGCTCGCCC AGGACGCGGC ACTGAAGATG CTCAACCTCG AGCAGACCAT CGAGGCCCGC
GTGCACGAAT TACTCAAGGT CTCGCGCCTG TTGCAGTACG ACAGCCTCAC GGGTCTGCCC
AACAGCACCT TGCTCGGTGA CCGTCTGACT CAATCGCTGG CCGCTTGCCG GCGCCATGAC
AAACAACTGG TGGTGATGTT TCTCGGGCTG GATCGCTTCA AGCGCATCAA CAATGCCCTG
GGCCATCCGG CGGGCGACGA GATGCTCAAA CGGGTCGGCC AGCAATTGCT CGCCTGCGTG
CGCGAATCGG ATTCGGTCTT TCGTTATGGC TCCGACGAAT TCGTGGTGAT GCTCAGCGAC
ATCAATCACC CGCAGCAGTC GCGCAGCATC GCCGAGAAAC TACTGAGCGC CATCCGCGCT
CCACAGACAA TCGTCGGGCA TGACGTGAGC GTCACGGCCA GTCTGGGCAT CAGCCTCTAC
CCCGATGACG GGCTCGAGGC CATCGAGCTG ATCAAGAAAG CTGAAACGGC CATGCGCAGC
GCCAAGGAAA ACGGACCGAA CGAAATCGGC TTTTTCATCG AAGCCATGAA CCAGCGCGCC
CGGGAACAGC AAAGCATCGA GTCGGGTATT CGCCAGGCCC TGCAACGCCA CGAATTCGTC
TTGCACTACC AGCCGAAAAT CGAGCTGGCC AGCGGCCGGG TAGTCGGTGC CGAGGCACTG
GTGCGCTGGC AGAAACCGGG GCATGGCTGG GTCTATCCCT CGGAGTTCAT CCCGGTGGCC
GAAGACAGCG GCCTGATCGT GCCGCTGAGC AAATGGGTGC TGGCCGAAGC CTGTCGTCAG
ACCCGTGAAT GGCAACAGGC GGGCTTGCCG CCGATTCGCA TGTCGGTCAA CACCTCGGCC
ATCGACTTTC GTCAGCGTCA CTTCGTCGAG GGCATCGAGC AGGTGCTGGC ACAGACCGGA
CTGGATCCCC GTCTGCTGGA ACTGGAGATC ACCGAAGGCG TGCTGATGCA GAACGTCGAC
GCGACGATGA GCGCGCTGAA CCGGCTGAAG GCGCTGGGCG TCCGACTGGC CATCGACGAC
TTCGGCACCG GCTATTCCAG CCTCAGCTAT CTGCGCCGGT TTCCCATCGA TGTGCTGAAG
ATCGATCAGT CGTTCATTCG CGGTCTGAGT CACGACAGCA GCGATGCGGC GCTGGTCGGC
GCGATCATCA GCCTGGGCAA GAGCCTGAAC CTGAACGTCA TCGCCGAAGG GGTGGAGACC
GCGCAAGAAT TGGCGTTCCT CAAGGACCAC CACTGTGAGG AAGGTCAGGG CTACTACTTC
AGCAAAGCCT TGCCGGTGGA CGCCTTTGCC CGATTGCTGG CGTCCGCTCA GCCTGGTCCG
TGGGGTGTTT CATGA
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| Protein sequence | MKTPFPQTNR RILIVDDTPA IHADFRKILT PDTHGEADLN TLEQTLFGTR QSPHLTFQLD
SAYQGQEALK LVQNALDEGR PYALAFTDMR MPPGWDGLET IEKLWAVDPN LQIALCTAYS
DYSWEAMAER LEFGDQLLIL KKPFDTLEIR QMANALTWKW QLAQDAALKM LNLEQTIEAR
VHELLKVSRL LQYDSLTGLP NSTLLGDRLT QSLAACRRHD KQLVVMFLGL DRFKRINNAL
GHPAGDEMLK RVGQQLLACV RESDSVFRYG SDEFVVMLSD INHPQQSRSI AEKLLSAIRA
PQTIVGHDVS VTASLGISLY PDDGLEAIEL IKKAETAMRS AKENGPNEIG FFIEAMNQRA
REQQSIESGI RQALQRHEFV LHYQPKIELA SGRVVGAEAL VRWQKPGHGW VYPSEFIPVA
EDSGLIVPLS KWVLAEACRQ TREWQQAGLP PIRMSVNTSA IDFRQRHFVE GIEQVLAQTG
LDPRLLELEI TEGVLMQNVD ATMSALNRLK ALGVRLAIDD FGTGYSSLSY LRRFPIDVLK
IDQSFIRGLS HDSSDAALVG AIISLGKSLN LNVIAEGVET AQELAFLKDH HCEEGQGYYF
SKALPVDAFA RLLASAQPGP WGVS
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