| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4546 |
|---|
| Symbol | |
|---|
| ID | 3712584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 5126952 |
|---|
| End bp | 5127869 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_350274 |
|---|
| Protein GI | 77460767 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.616108 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTTGAGA TCCGTCACCT GAAAACCCTG CATGCCCTGC GTGAAGCCGA CAGCCTGGTC
GATGCAGCCG ACCGCCTGCA CCTGACCCAG TCGGCGCTGT CCCACCAGTT CAAGGAGCTG
GAAGAGCGCA TGGGCATGCC GTTGTTCGTG CGCAAGACCA AACCGGTGCG CTTCACCAGC
GCCGGCCTGC GCCTGTTGCA ACTGGCCGAC GCGACCCTGC CGCTGCTGCG TGCCGCCGAA
CGTGACATTG GGCGTCTGGC CGGTGGCACT GCCGGACGTC TGCACATGGC CATCGAATGC
CACAGCTGCT TCCAGTGGCT GATGCCGACC ATCGATCAGT TCCGCGATGC CTGGCCGGAA
GTCGAACTCG ACCTCGCTTC GGGTTTCTCG TTTGCACCGC TGCCGGCGCT GGCCCGGGGC
GATCTGGATC TGGTGGTGAC GTCCGACCCG CTGGAAATCG CCGGCATCAC CTACGTGCCG
CTGTTCACCT ACGAAGCCAT GCTCGCGGTC GCCAATCAGC ACGTGCTGGC AAGCAAACCG
TACATCGTTC CCGAAGACCT GCTGACCGAA ACCCTGATCA CCTACCCGGT CGAACGCGAT
CGCCTGGACA TCTTCACCCG TTTCCTCGAA CCGGCCGACA TCGAACCGGC GCAGGTACGC
ACCTCGGAGC TGACGGTGAT GATGATGCAG CTGGTGGCCA GCGGCCGTGG CGTGTGCGGC
ATGCCGCACT GGGCGCTGCA TGAATACAGC TCGCGGGGTT ACGTGAAGGG CAAGCGGCTG
GGCGAGAAAG GTCTGTTTGC CACGCTGTAC GCAGCGATCC GCGCCGACAT GCTGGATGCG
CCGTACATGC GCGACTTCCT GCTGACGGCC AAGGACACTT CGTTCTCGAC CCTGGATGGG
GTCAGCGCGG TTCGTTGA
|
|---|
| Protein sequence | MLEIRHLKTL HALREADSLV DAADRLHLTQ SALSHQFKEL EERMGMPLFV RKTKPVRFTS
AGLRLLQLAD ATLPLLRAAE RDIGRLAGGT AGRLHMAIEC HSCFQWLMPT IDQFRDAWPE
VELDLASGFS FAPLPALARG DLDLVVTSDP LEIAGITYVP LFTYEAMLAV ANQHVLASKP
YIVPEDLLTE TLITYPVERD RLDIFTRFLE PADIEPAQVR TSELTVMMMQ LVASGRGVCG
MPHWALHEYS SRGYVKGKRL GEKGLFATLY AAIRADMLDA PYMRDFLLTA KDTSFSTLDG
VSAVR
|
|---|
| |