Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4533 |
Symbol | |
ID | 3717902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5107303 |
End bp | 5108058 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | DeoR family transcriptional regulator |
Protein accession | YP_350261 |
Protein GI | 77460754 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.350133 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.264738 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTGC CTCCCCGTCA GCAGCAAATC CTCGAACTGG TCCGCGAACG CGGCTATGTG AGCATCGAGG AAATGGCCAC GCTGTTCGTT GTTACCCCGC AAACCATCCG CCGCGATATC AATCAACTGG CGGAAGCCAA TCTGCTGCGT CGCTACCACG GCGGCGCCGC CTATGATTCC AGTGTCGAAA ACACTGCCTA CGCGATGCGC GCCGATCAGA TGCGCGATGA AAAGCAACGC ATCGGCGAAG CCATTGCCGC GCAAATTCCC GATCACGCCT CGCTGTTCAT CAACATCGGC ACCACCACCG AATCGATTGC CCGCGCCCTG CTCAATCACA GCCATCTGAA GATCATCACC AACAACCTGC ACGTCGCCTC GATGCTCAGT GCCAAGGATG ATTTCGATGT GCTGCTGACC GGCGGCAATG TGCGTCGCGA TGGCGGCGTG GTGGGCCAGG CGAGCGTGGA CTTCATCAAT CAGTTCAAGG TCGACTTTGC GCTGGTGGGC ATCAGCGGCA TCGACGAAGA CGGCAGCCTG CTCGACTTCG ATTACCAGGA AGTGCGGGTG TCCCAGGCGA TCATCGCCAA TGCCCGGCAG GTGATCCTGG CGGCGGACTC CAGCAAGTTC GGCCGTAACG CGATGATCCG CCTCGGCCCG ATCAGCCTGA TCGATTGCCT GGTGACCGAT CAGCAGCCGG TGCCAGCCCT GGCGCAACTG CTGAGCCAGC ACAAGATTCG CCTGGAAGTC GTTTAA
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Protein sequence | MNLPPRQQQI LELVRERGYV SIEEMATLFV VTPQTIRRDI NQLAEANLLR RYHGGAAYDS SVENTAYAMR ADQMRDEKQR IGEAIAAQIP DHASLFINIG TTTESIARAL LNHSHLKIIT NNLHVASMLS AKDDFDVLLT GGNVRRDGGV VGQASVDFIN QFKVDFALVG ISGIDEDGSL LDFDYQEVRV SQAIIANARQ VILAADSSKF GRNAMIRLGP ISLIDCLVTD QQPVPALAQL LSQHKIRLEV V
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