Gene Pfl01_4533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4533 
Symbol 
ID3717902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5107303 
End bp5108058 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content60% 
IMG OID 
ProductDeoR family transcriptional regulator 
Protein accessionYP_350261 
Protein GI77460754 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.350133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.264738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGC CTCCCCGTCA GCAGCAAATC CTCGAACTGG TCCGCGAACG CGGCTATGTG 
AGCATCGAGG AAATGGCCAC GCTGTTCGTT GTTACCCCGC AAACCATCCG CCGCGATATC
AATCAACTGG CGGAAGCCAA TCTGCTGCGT CGCTACCACG GCGGCGCCGC CTATGATTCC
AGTGTCGAAA ACACTGCCTA CGCGATGCGC GCCGATCAGA TGCGCGATGA AAAGCAACGC
ATCGGCGAAG CCATTGCCGC GCAAATTCCC GATCACGCCT CGCTGTTCAT CAACATCGGC
ACCACCACCG AATCGATTGC CCGCGCCCTG CTCAATCACA GCCATCTGAA GATCATCACC
AACAACCTGC ACGTCGCCTC GATGCTCAGT GCCAAGGATG ATTTCGATGT GCTGCTGACC
GGCGGCAATG TGCGTCGCGA TGGCGGCGTG GTGGGCCAGG CGAGCGTGGA CTTCATCAAT
CAGTTCAAGG TCGACTTTGC GCTGGTGGGC ATCAGCGGCA TCGACGAAGA CGGCAGCCTG
CTCGACTTCG ATTACCAGGA AGTGCGGGTG TCCCAGGCGA TCATCGCCAA TGCCCGGCAG
GTGATCCTGG CGGCGGACTC CAGCAAGTTC GGCCGTAACG CGATGATCCG CCTCGGCCCG
ATCAGCCTGA TCGATTGCCT GGTGACCGAT CAGCAGCCGG TGCCAGCCCT GGCGCAACTG
CTGAGCCAGC ACAAGATTCG CCTGGAAGTC GTTTAA
 
Protein sequence
MNLPPRQQQI LELVRERGYV SIEEMATLFV VTPQTIRRDI NQLAEANLLR RYHGGAAYDS 
SVENTAYAMR ADQMRDEKQR IGEAIAAQIP DHASLFINIG TTTESIARAL LNHSHLKIIT
NNLHVASMLS AKDDFDVLLT GGNVRRDGGV VGQASVDFIN QFKVDFALVG ISGIDEDGSL
LDFDYQEVRV SQAIIANARQ VILAADSSKF GRNAMIRLGP ISLIDCLVTD QQPVPALAQL
LSQHKIRLEV V