Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4527 |
Symbol | |
ID | 3717896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5100992 |
End bp | 5101915 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | ornithine carbamoyltransferase |
Protein accession | YP_350255 |
Protein GI | 77460748 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.145065 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAGCG CAAGGCACTT TCTCTCCCTG ATGGATTGCA CGCCCGAAGA GCTGGTCAGC GTGATCCGTC GAGGCGTTGA GCTCAAGGAC CTGCGTAACC GCGGCGTACT GTTCGAGCCT CTGAAAAACC GCGTCCTGGG GATGATCTTC GAGAAATCCT CGACCCGTAC CCGGATCTCC TTCGAGGCCG GCATGATCCA GCTCGGCGGC CAGGCGATCT TCCTGTCGCC GCGCGACACC CAACTGGGTC GTGGCGAGCC GATCGGCGAC TGCGCCATCG TCATGTCGAG CATGCTCGAC GCAGTGATGA TCCGTACCTT TGCCCACAGC ACCCTGACCG AATTCGCTGC CAACTCCCGC GTGCCGGTGA TCAACGGCCT GTCCGATGAC CTGCATCCGT GTCAGTTGCT GGCCGACATG CAGACCTTCC TCGAACACCG CGGCTCCATC CAGGGCAAGA CCGTGGCCTG GATCGGCGAC GGCAACAACA TGTGCAACAG CTATATAGAA GCGGCGATCC AGTTCGACTT CCAGTTGCGC GTGGCCTGCC CGGAAGGCTA TGAGCCAAAC CCTGAATTCG TGGCCAAGGC CGGTGACCGC GTGACCATCG TCCGCGACCC GAAAGACGCC GTGCGCGGCG CGCATCTGGT GAGCACCGAC GTCTGGACCT CCATGGGGCA GGAAGAGGAA ACCGCCAAGC GCCTCAAACT GTTCGCGCCG TTTCAGGTCA ACCGCGCCCT GCTCGACCTG GCTGCCGATG ACGTGCTATT CATGCACTGC CTGCCCGCTC ACCGCGGTGA GGAAATCAGC CTCGACCTGC TCGATGATCC GCGCTCCGTC GCCTGGGATC AGGCAGAAAA CCGTCTCCAC GCACAGAAGG CCCTGCTCGA GTTCCTCGTC GAACCGGCAT ATCACCACGC ATGA
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Protein sequence | MMSARHFLSL MDCTPEELVS VIRRGVELKD LRNRGVLFEP LKNRVLGMIF EKSSTRTRIS FEAGMIQLGG QAIFLSPRDT QLGRGEPIGD CAIVMSSMLD AVMIRTFAHS TLTEFAANSR VPVINGLSDD LHPCQLLADM QTFLEHRGSI QGKTVAWIGD GNNMCNSYIE AAIQFDFQLR VACPEGYEPN PEFVAKAGDR VTIVRDPKDA VRGAHLVSTD VWTSMGQEEE TAKRLKLFAP FQVNRALLDL AADDVLFMHC LPAHRGEEIS LDLLDDPRSV AWDQAENRLH AQKALLEFLV EPAYHHA
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