Gene Pfl01_4454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4454 
Symbol 
ID3717614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5019674 
End bp5022460 
Gene Length2787 bp 
Protein Length928 aa 
Translation table11 
GC content60% 
IMG OID 
Productinsecticidal toxin protein, putative 
Protein accessionYP_350182 
Protein GI77460675 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.543889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCA GCGTGCACTG GCACACCCCG ACGGTGGCCG TCAACGGACC GCGCGGCGAG 
ACCTACAGAC ACATCGATTA CCTGCGCAGG GTGGCTGGAG AGGATGTGCA GGCGCTCATT
ACCCGACAGC AATATGACGT TGCCGGCCGA CTGGTCGCGC TGCGCGATCC GCGTCTGCCC
ACGCCCAATA CCACAACGGT GCACAGGCTG GACGGCGTGG CGATCAGGAC GATCAACGTT
GACGGTGGCG AAAACACGGT GCTGCAGGGT GTCGGTGGCG AGCTTCTTCA GAATTGGGAT
GCTAACCGCA ATCACCGGGA AATGACCTAC GACCCGCAAC TGCGTCTGCG GGCCGTCACG
GAAAACGGTG CAGCGAACTT CGAAACCTTC CACTACCTCG ACGCTTCGGC CGACCCGACA
CACAATCTGC GCGGACAGAT GACGGCGCTG AGCGATCCAT CAGGCACGCT CGCCCTCGAC
AGCTTCGGCA TGCACGGACA GACGCTGGAA GAAACCCGCA CCTTCAAGGA CGGCAAAACC
TGCACCAGCC GTCGGGTCTT CAGCGCCGTC GGCGCACTGT TGCAAACCAC TGACGCCGGC
GGGCACCTGC AACAGTCGAC CTACGACATC GCCGGGCAAC TCGTCCAGGT ACAACTGCAA
CTCGACGGAC AAGCCTTCCA GCCGGTTTTG AAAGGTGCGG ATTACAACGC CGCCGGCCAG
ATCACCGAAC AACGGCTCGG CAACGACGTG ACCAACCGCT GGTGCTACCG GGACACCGAC
GGACGCCTGC TGCGACAGTA CGCGCAAAAG GCTTCAGGGC AGGCGATTCA GGATTTCGGG
TATGGATACG ACCGGGTGGG CAACACCACC CGCATTGTTG ACCACACCTA CACACCGACA
TATTTCCGCA ACCAGCGGGT CGACGGCCAG CGCACGTTTG ACCATGACAC GACTTATCAG
CTGATCCGCG CCACCGGGTA CAGCGACGCC CCGCCCAGAG ACAACCCGGG CCGGCCTCAG
CCAACCGACC CACGGGACCG GCGCAACTAT GTCGAGACCT ACGAATACGA CGAAGGCAAA
AACCTGACCC TGCTCACCCA TGTCCGCGAC GGCAGTGCCC ATACCTTCGA GATGTGCATC
GACCCGGGCA GCAACCGTGG TGTGCGCTGG AAACCGGGCG ATCCGGCTCC GGACTTCCGC
GCATTGTTCG ACCGTGCCGG CAATCAGCTA GCGCTGCAGC GGGGTCAACC CATGCAGTGG
AACAGCCGCA ATCAATTGGA GTCACTGACC CTGGTGGAAC ATGCCAGCGG TCCACCTGAC
CGGGAGCTGT ATCAATACAG CCAGGGCGCC AGGGTCTACA AACGCCTCGA AACCCACACT
CGCAAGGTCA GCCATGTCGA GCAAGTGCAC TACGTGGGCA ATCTGGAGAT CCGCAGCAAA
AGCTCGGGTG AAGAGCTGCA CCGGATCACC GTAGCCACCG GCGTCGGCGA AGTGACATGC
CTGCATTGGG TCGCCGGAAA ACCGCCCGGC ATCGACGCCG ATCAGATGCG TTATTCCCTG
ACGGATCATC TGGGCTCAAG CGTGACCGAG CTCGACCAGA ACGCGCGACT GATCAGCCAG
GAAGGCTATT TCGCCTTCGG CGCAACCGCG TGGATGGTCG CAGACAAACT CGTGGAGGCG
GATTACAAGT TCATCCGCTA CTCGGGCAAG GAGATGGAAC GCAGCGGGCT TTATCATTAT
GGGGTGCGGT ATTACGCGCC TTGGCTGGGA CGCTGGGTCA GCACTGACCC GACGGGAGAT
GAGGACGGGC CGAATCGATA TGCGTTTGTC GGGAACAGCC CACTGCGCTA CGTGGATCCT
GCGGGAGGTA CCAGGGCGGA GGCGACCATC ATGCTGTACA ACAGTTTTGT TTCCCAGGTG
TCCGGGAATG CCGAATACAC ACTCCACAGG CTGCACAACA TCATCAAGCA AAAAGGCTTC
ACACTAAGCC TGATGGCCAA CGTGGCGGTC GAAGGCCTGA AAGGTGCAAT CGGCTATGAG
GCCGGCCTGA TCGGCGGCGG ACAAATCGAC ATGGTCATGC CGGGGTTCCC GACCACTACG
CCTTACACCA CACCCGGTGG AGTGATCGGC GGCAACATCG GGGGCGATGT GTCGGGAGCG
ATCGCAGACG TACCGTTGAG GAAGATGCCG TTCCATATCG GCCCGCTGAT CCCACAGACC
TCGAAACTGT CCGTGGCAGC GATTGACAGC GACCTCGGCA TAACGGGTGC CGTCAAGGAA
ATACGCAACT GGAGCGATTT CAAGGATGAG GTCGTGCATC CGGCGCTCAA CTCGGTGATC
AACCCTTACT TCCTGATGAG CAGAGTAATG GGCTCTTGGA TATCGATCAT CCCCGCCGCT
CTGGAGTTGT TTGCCCGGGC AATCGAGGTT GAGGACATCA AGAATCGCCT TGACCCGGTC
AAGATCCAGA AGATCGAAGA CATGCTCAAC GGTTGGCAAA CCGCTCTACA GGAACGCTCG
ACATGGGTCG AGAATGCCTT TGATGCATTA GGCAGCGACG TGCTCTATCC GGCGGATGTG
CTTCCCAACG TCAACATGAC GACCTCAAAA GACACGCTGG CACCGATCAG CAGAGCCGGT
TTGCGGCAGC AAACCAGAGC CGTCATGGCG GATATCGCGC ACGCCAAAAG AGGACTGGCC
TACTACAAGG AGATGGGCAC CACGGACAAT CAATACTTGC TGAGCCAGGC TCATGTTAAA
TCGCCGTCCC GCAACCGGAC CACGTGA
 
Protein sequence
MNASVHWHTP TVAVNGPRGE TYRHIDYLRR VAGEDVQALI TRQQYDVAGR LVALRDPRLP 
TPNTTTVHRL DGVAIRTINV DGGENTVLQG VGGELLQNWD ANRNHREMTY DPQLRLRAVT
ENGAANFETF HYLDASADPT HNLRGQMTAL SDPSGTLALD SFGMHGQTLE ETRTFKDGKT
CTSRRVFSAV GALLQTTDAG GHLQQSTYDI AGQLVQVQLQ LDGQAFQPVL KGADYNAAGQ
ITEQRLGNDV TNRWCYRDTD GRLLRQYAQK ASGQAIQDFG YGYDRVGNTT RIVDHTYTPT
YFRNQRVDGQ RTFDHDTTYQ LIRATGYSDA PPRDNPGRPQ PTDPRDRRNY VETYEYDEGK
NLTLLTHVRD GSAHTFEMCI DPGSNRGVRW KPGDPAPDFR ALFDRAGNQL ALQRGQPMQW
NSRNQLESLT LVEHASGPPD RELYQYSQGA RVYKRLETHT RKVSHVEQVH YVGNLEIRSK
SSGEELHRIT VATGVGEVTC LHWVAGKPPG IDADQMRYSL TDHLGSSVTE LDQNARLISQ
EGYFAFGATA WMVADKLVEA DYKFIRYSGK EMERSGLYHY GVRYYAPWLG RWVSTDPTGD
EDGPNRYAFV GNSPLRYVDP AGGTRAEATI MLYNSFVSQV SGNAEYTLHR LHNIIKQKGF
TLSLMANVAV EGLKGAIGYE AGLIGGGQID MVMPGFPTTT PYTTPGGVIG GNIGGDVSGA
IADVPLRKMP FHIGPLIPQT SKLSVAAIDS DLGITGAVKE IRNWSDFKDE VVHPALNSVI
NPYFLMSRVM GSWISIIPAA LELFARAIEV EDIKNRLDPV KIQKIEDMLN GWQTALQERS
TWVENAFDAL GSDVLYPADV LPNVNMTTSK DTLAPISRAG LRQQTRAVMA DIAHAKRGLA
YYKEMGTTDN QYLLSQAHVK SPSRNRTT