Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4454 |
Symbol | |
ID | 3717614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5019674 |
End bp | 5022460 |
Gene Length | 2787 bp |
Protein Length | 928 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | insecticidal toxin protein, putative |
Protein accession | YP_350182 |
Protein GI | 77460675 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.543889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCA GCGTGCACTG GCACACCCCG ACGGTGGCCG TCAACGGACC GCGCGGCGAG ACCTACAGAC ACATCGATTA CCTGCGCAGG GTGGCTGGAG AGGATGTGCA GGCGCTCATT ACCCGACAGC AATATGACGT TGCCGGCCGA CTGGTCGCGC TGCGCGATCC GCGTCTGCCC ACGCCCAATA CCACAACGGT GCACAGGCTG GACGGCGTGG CGATCAGGAC GATCAACGTT GACGGTGGCG AAAACACGGT GCTGCAGGGT GTCGGTGGCG AGCTTCTTCA GAATTGGGAT GCTAACCGCA ATCACCGGGA AATGACCTAC GACCCGCAAC TGCGTCTGCG GGCCGTCACG GAAAACGGTG CAGCGAACTT CGAAACCTTC CACTACCTCG ACGCTTCGGC CGACCCGACA CACAATCTGC GCGGACAGAT GACGGCGCTG AGCGATCCAT CAGGCACGCT CGCCCTCGAC AGCTTCGGCA TGCACGGACA GACGCTGGAA GAAACCCGCA CCTTCAAGGA CGGCAAAACC TGCACCAGCC GTCGGGTCTT CAGCGCCGTC GGCGCACTGT TGCAAACCAC TGACGCCGGC GGGCACCTGC AACAGTCGAC CTACGACATC GCCGGGCAAC TCGTCCAGGT ACAACTGCAA CTCGACGGAC AAGCCTTCCA GCCGGTTTTG AAAGGTGCGG ATTACAACGC CGCCGGCCAG ATCACCGAAC AACGGCTCGG CAACGACGTG ACCAACCGCT GGTGCTACCG GGACACCGAC GGACGCCTGC TGCGACAGTA CGCGCAAAAG GCTTCAGGGC AGGCGATTCA GGATTTCGGG TATGGATACG ACCGGGTGGG CAACACCACC CGCATTGTTG ACCACACCTA CACACCGACA TATTTCCGCA ACCAGCGGGT CGACGGCCAG CGCACGTTTG ACCATGACAC GACTTATCAG CTGATCCGCG CCACCGGGTA CAGCGACGCC CCGCCCAGAG ACAACCCGGG CCGGCCTCAG CCAACCGACC CACGGGACCG GCGCAACTAT GTCGAGACCT ACGAATACGA CGAAGGCAAA AACCTGACCC TGCTCACCCA TGTCCGCGAC GGCAGTGCCC ATACCTTCGA GATGTGCATC GACCCGGGCA GCAACCGTGG TGTGCGCTGG AAACCGGGCG ATCCGGCTCC GGACTTCCGC GCATTGTTCG ACCGTGCCGG CAATCAGCTA GCGCTGCAGC GGGGTCAACC CATGCAGTGG AACAGCCGCA ATCAATTGGA GTCACTGACC CTGGTGGAAC ATGCCAGCGG TCCACCTGAC CGGGAGCTGT ATCAATACAG CCAGGGCGCC AGGGTCTACA AACGCCTCGA AACCCACACT CGCAAGGTCA GCCATGTCGA GCAAGTGCAC TACGTGGGCA ATCTGGAGAT CCGCAGCAAA AGCTCGGGTG AAGAGCTGCA CCGGATCACC GTAGCCACCG GCGTCGGCGA AGTGACATGC CTGCATTGGG TCGCCGGAAA ACCGCCCGGC ATCGACGCCG ATCAGATGCG TTATTCCCTG ACGGATCATC TGGGCTCAAG CGTGACCGAG CTCGACCAGA ACGCGCGACT GATCAGCCAG GAAGGCTATT TCGCCTTCGG CGCAACCGCG TGGATGGTCG CAGACAAACT CGTGGAGGCG GATTACAAGT TCATCCGCTA CTCGGGCAAG GAGATGGAAC GCAGCGGGCT TTATCATTAT GGGGTGCGGT ATTACGCGCC TTGGCTGGGA CGCTGGGTCA GCACTGACCC GACGGGAGAT GAGGACGGGC CGAATCGATA TGCGTTTGTC GGGAACAGCC CACTGCGCTA CGTGGATCCT GCGGGAGGTA CCAGGGCGGA GGCGACCATC ATGCTGTACA ACAGTTTTGT TTCCCAGGTG TCCGGGAATG CCGAATACAC ACTCCACAGG CTGCACAACA TCATCAAGCA AAAAGGCTTC ACACTAAGCC TGATGGCCAA CGTGGCGGTC GAAGGCCTGA AAGGTGCAAT CGGCTATGAG GCCGGCCTGA TCGGCGGCGG ACAAATCGAC ATGGTCATGC CGGGGTTCCC GACCACTACG CCTTACACCA CACCCGGTGG AGTGATCGGC GGCAACATCG GGGGCGATGT GTCGGGAGCG ATCGCAGACG TACCGTTGAG GAAGATGCCG TTCCATATCG GCCCGCTGAT CCCACAGACC TCGAAACTGT CCGTGGCAGC GATTGACAGC GACCTCGGCA TAACGGGTGC CGTCAAGGAA ATACGCAACT GGAGCGATTT CAAGGATGAG GTCGTGCATC CGGCGCTCAA CTCGGTGATC AACCCTTACT TCCTGATGAG CAGAGTAATG GGCTCTTGGA TATCGATCAT CCCCGCCGCT CTGGAGTTGT TTGCCCGGGC AATCGAGGTT GAGGACATCA AGAATCGCCT TGACCCGGTC AAGATCCAGA AGATCGAAGA CATGCTCAAC GGTTGGCAAA CCGCTCTACA GGAACGCTCG ACATGGGTCG AGAATGCCTT TGATGCATTA GGCAGCGACG TGCTCTATCC GGCGGATGTG CTTCCCAACG TCAACATGAC GACCTCAAAA GACACGCTGG CACCGATCAG CAGAGCCGGT TTGCGGCAGC AAACCAGAGC CGTCATGGCG GATATCGCGC ACGCCAAAAG AGGACTGGCC TACTACAAGG AGATGGGCAC CACGGACAAT CAATACTTGC TGAGCCAGGC TCATGTTAAA TCGCCGTCCC GCAACCGGAC CACGTGA
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Protein sequence | MNASVHWHTP TVAVNGPRGE TYRHIDYLRR VAGEDVQALI TRQQYDVAGR LVALRDPRLP TPNTTTVHRL DGVAIRTINV DGGENTVLQG VGGELLQNWD ANRNHREMTY DPQLRLRAVT ENGAANFETF HYLDASADPT HNLRGQMTAL SDPSGTLALD SFGMHGQTLE ETRTFKDGKT CTSRRVFSAV GALLQTTDAG GHLQQSTYDI AGQLVQVQLQ LDGQAFQPVL KGADYNAAGQ ITEQRLGNDV TNRWCYRDTD GRLLRQYAQK ASGQAIQDFG YGYDRVGNTT RIVDHTYTPT YFRNQRVDGQ RTFDHDTTYQ LIRATGYSDA PPRDNPGRPQ PTDPRDRRNY VETYEYDEGK NLTLLTHVRD GSAHTFEMCI DPGSNRGVRW KPGDPAPDFR ALFDRAGNQL ALQRGQPMQW NSRNQLESLT LVEHASGPPD RELYQYSQGA RVYKRLETHT RKVSHVEQVH YVGNLEIRSK SSGEELHRIT VATGVGEVTC LHWVAGKPPG IDADQMRYSL TDHLGSSVTE LDQNARLISQ EGYFAFGATA WMVADKLVEA DYKFIRYSGK EMERSGLYHY GVRYYAPWLG RWVSTDPTGD EDGPNRYAFV GNSPLRYVDP AGGTRAEATI MLYNSFVSQV SGNAEYTLHR LHNIIKQKGF TLSLMANVAV EGLKGAIGYE AGLIGGGQID MVMPGFPTTT PYTTPGGVIG GNIGGDVSGA IADVPLRKMP FHIGPLIPQT SKLSVAAIDS DLGITGAVKE IRNWSDFKDE VVHPALNSVI NPYFLMSRVM GSWISIIPAA LELFARAIEV EDIKNRLDPV KIQKIEDMLN GWQTALQERS TWVENAFDAL GSDVLYPADV LPNVNMTTSK DTLAPISRAG LRQQTRAVMA DIAHAKRGLA YYKEMGTTDN QYLLSQAHVK SPSRNRTT
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