| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4431 |
|---|
| Symbol | |
|---|
| ID | 3713470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 4990738 |
|---|
| End bp | 4992627 |
|---|
| Gene Length | 1890 bp |
|---|
| Protein Length | 629 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | chemotaxis sensory transducer, Cache sensor |
|---|
| Protein accession | YP_350159 |
|---|
| Protein GI | 77460652 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAA ATCTGCGTTT CAGCCACAAA ATTTTGCTTG CCGCCGCCCT CATCGTCATT
GCCGCCTTCG CCTCGTTCAC GCTGTACAAC GACTGGTTGC AGCGCAATGC GATTCGCGAG
GATCTGGACA ATTACCTCAA CGAGATGGGC GAGGTCACAG CCGACAATAT CCAGACCTGG
CTCAGCGGGC GCATCCTGCT GATCGAGAAC GCTGCCCAGA ATATCGCCAT CAATCCCGAG
CCTGCCGCCG TCGCCAGCCT GCTGGAACAG AAAGCCCTGA CCTCGACCTT CATGGCGTCC
TACCTCGGCG ATGCCACCGG GCACTTCACC ATCCGCCCGG ACGCGAAGAT GCCGGACGGT
TTCGATCCGC GTGTTCGCCC TTGGTATAAA GGTGCCGAAA GCAGCAGCAC CTCGACCCTG
ACCGAACCGT ACATCGACGC GGCCACCGGC CAGACCATCA TTTCCATCGC CACCGCCGCG
AAGAAGGCCG GCCAGAGCGT CGGCGTGGTG GGCGGCGACC TGAGCCTGCA AACCCTGATC
AACACCCTCA GCGCCCGGGA TTTCTCCGGC ATGGGCTACG CGTTCCTGGT CAGCGCCGAC
GGCAAGATCC TGGTGCATCC GGATAAAGCC CTGGTGATGA AGTCCCTGAA GGAAGCCTAT
CCGCAGGACA CCCCGCGCAT CAGCAGCGAT TTCAGTGAAG TCACCGTCGA CGGCAAGACC
CGCATCGTCA ACTTCACCCC GATCAAGGGC CTGCCGTCGG TGAACTGGTA TATCGGCTTG
TCGGTGGACA AGGACAAAGC CTTCTCGATG CTCAGCGAAT TCCGCACCTC CGCCGTGATC
GCGACCGTGA TTGCCGTGGC GATCATCATC GCCCTGCTTG GCATGCTGAT CCGCATTCTG
ATCCAGCCGC TGCACGTGAT GACCCGCGCC ATGGAAGACA TTGCGGATGG CGAAGGCGAC
CTGACCAAAC GCCTGACCAT CCAGAACCAG GACGAGTTCG GCGTGCTCGG CACGGCGTTC
AACCGTTTCG TCGAACGTAT CCACGGCTCG ATCCGCGAAG TGTCGTCGGC AACCGGCCAG
GTCAACGAAG TCGCCCTGCG CGTGGTCGCG GCCTCCAACT CGTCGATGTA CAACTCCGAC
CAGCAAGCCT CGCGCACCAA CAGCGTGGCC GCCGCCATCA ACCAACTCGG CGCCGCCGCC
CAGGAAATCG CCCGCAACGC CGCGCAAGCC TCGACCCAGG CCAGCGACGC CCGTGGCCTG
GCCGAAGACG GCCAGCAAGT GGTGGAACGC AGCATCAAGG CCATGAACCA GCTGTCGAGC
ATGCTCAGCG CGTCCAGCAG CAATATCGAA TCGCTGAACA GCAAGACCGT GAACATCGGC
CAGATCCTGG AAGTGATCAC CAGCATTTCC CAGCAAACCA ACCTGCTGGC GCTCAACGCC
GCCATCGAAG CGGCCCGTGC CGGTGAAGCC GGTCGTGGTT TTGCGGTGGT GGCGGACGAA
GTGCGCAACC TCGCCCACCG CACCCAGGAA TCGGCGCAAC AGGTGCAGAC CATGATCGAG
GAGCTGCAAG TCGGCGCCCG CGAATCCGTC AGCACCATGA GCGACAGCCA GCGCCACAGC
CAGGACAGCG TAGAGATCGC CAACCTCGCC GGCGAGCGTT TGAACAGCGT GACTCAGCGC
ATTGGTGAAA TCGACGGGAT GAACCAGTCG GTGGCCACCG CGACCGAGGA ACAGACTGCC
GTGGTCGAGT CGATCAACGT AGATATCACC GAGATCAACA CGCTGAACCA GGAAGGTGTC
GAGAACTTGC AGGCGACGTT GCGGGCTTGC TCGGATCTGG AACAGCAGGC TTCGCGATTG
AAGCAACTTG TTGGCAGCTT CCGCATTTAA
|
|---|
| Protein sequence | MNKNLRFSHK ILLAAALIVI AAFASFTLYN DWLQRNAIRE DLDNYLNEMG EVTADNIQTW
LSGRILLIEN AAQNIAINPE PAAVASLLEQ KALTSTFMAS YLGDATGHFT IRPDAKMPDG
FDPRVRPWYK GAESSSTSTL TEPYIDAATG QTIISIATAA KKAGQSVGVV GGDLSLQTLI
NTLSARDFSG MGYAFLVSAD GKILVHPDKA LVMKSLKEAY PQDTPRISSD FSEVTVDGKT
RIVNFTPIKG LPSVNWYIGL SVDKDKAFSM LSEFRTSAVI ATVIAVAIII ALLGMLIRIL
IQPLHVMTRA MEDIADGEGD LTKRLTIQNQ DEFGVLGTAF NRFVERIHGS IREVSSATGQ
VNEVALRVVA ASNSSMYNSD QQASRTNSVA AAINQLGAAA QEIARNAAQA STQASDARGL
AEDGQQVVER SIKAMNQLSS MLSASSSNIE SLNSKTVNIG QILEVITSIS QQTNLLALNA
AIEAARAGEA GRGFAVVADE VRNLAHRTQE SAQQVQTMIE ELQVGARESV STMSDSQRHS
QDSVEIANLA GERLNSVTQR IGEIDGMNQS VATATEEQTA VVESINVDIT EINTLNQEGV
ENLQATLRAC SDLEQQASRL KQLVGSFRI
|
|---|
| |