Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4423 |
Symbol | |
ID | 3713462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4979890 |
End bp | 4981926 |
Gene Length | 2037 bp |
Protein Length | 678 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | multi-sensor Signal transduction histidine kinase |
Protein accession | YP_350151 |
Protein GI | 77460644 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATTGC GCCAGCGTCT TGAAAACCTG CCGGTCGGCC AGAAACTGCT GGCCGCCCTG CTGGTGCTGT TGACCACCGT GTTGCTGGTC GCCAACCTGA CCTTTATCAG CGCCGCCTAT TACATTTCCC AGGAAAGCAT GGCGCCCCAG GCGTTGCAGA CCATCGGCCG GCTGGTGTCG AACCCGAGCC TGGTGGCCGA AGCCTTGCAA TCGCCACAAA GCGCCGAGCG TCTGCTCAAG GAGCTCGACA GCTATTCTCC GCTGCGTGCA GCCGCTTTAT ATGACGGCAA AGGCGAACGT CTGGCGCAGT TGCAACACGG CGACAAACTC AACCTGCCGG AACGCTACCG GCACATCGAA GCCTGGCAAC TGACCGAGTT TCGCAGCAAT CAACTGATCA CCCTGCCCCG CCCCGGCACC GCGCCGGGCC ATCTGTTGCT GGTGGCCAGC AGCGAGCTGC CGGTGGCGTT CTATACCGGC ACACTCACGG CCAGCCTGGG GATCCTGATT TTCAGTGTGC TGCTGTGGCT GGTCATCGCC CGGCAGATCA AGCGCCTGAT CACCCGGCCG ATTCATCAAC TGGAAGAACT GTCCCGTCAG GTAACCCGCG AGGAGAACTA TGCCCTGCGC GCCTCCCGGG GCAACCATGA CGAAATCGGC AGCCTCGCCG AAGCGTTCAA CACCATGCTG TCGCGCATCG AGGCGAGGGA GCAGCAACTC AAGCGTGCCC GCGATGATTC CCAGGCGGCT TACGATCAGG CCCAGGGGCT GGCCGAAGAA ACCCGCCACA CCAACCGCAA GCTGGAACTG GAAGTCCAGG TGCGCAGCAA GATCGAGAAG AAACTCACCG GGTTCCAGAA CTACCTCAAC AGCATCATCG ACTCCATGCC CTCGGCGCTG ATCGCCCTCG ACGAACAGCT CTACGTCACG CAGTGGAACC AGGAGGCCAG CGCCCTTTCC GGTACACGAC TGGACGAAGC GCTTAACCAG CCGATCTTCC TCGCGTTCGA GCCGCTCAAG CCGTTCCTGC CGCAACTCAA GCAGACCGTC GAACAGCACA CTGTGGCGAA AATCGAGCGG GTGACGTGGT TCAAGGACGA CGAGCCCAAG CACTACGCCC TCACCTTCTA CCCGTTGATG GGCGGTGCCG GGCGCGGCGT GGTGATCCGG ATCGACGACA TCACCCAGCG CCTGTCGCTG GAAGAAATGA TGGTGCAGTC GGAGAAAATG CTGTCGGTCG GTGGCCTCGC CGCCGGCATG GCCCACGAGA TCAATAACCC GCTGGGGGCG ATCCTGCACA ACGTGCAGAA CATTCGCCGA CGCCTGTCGC CGGACCTGCC GAAGAACCTC GAGCAGGCCG AGCAACTGGG CATCGAACTC GATACCGTGA ACCGTTATCT GCAAGGCCGG GAAGTCCCGC AACTGCTCGA CGGCATTCAG CAGGCCGGCG CCCGGGCGGC GAAAATCGTC ACCCACATGC TCAGTTTCAG CCGTCGCAGC AACCGCCAGA TGGCGCCGTG CGACCTGCCG GCGCTGATCG ATCAAGCCGT GGAAATCGCC GGCAACGACT TCGACCTGGC CATCGGCTTC GACTTTAAGG GGCAGGCGAT CATTCGCCAG TTCGACCCGG CGCTGGGCCC GGTGCCCGGC ACTGCCAACG AACTGGAACA GGTGCTGCTG AACCTGCTGA AAAACGCCGC GCAGGCGATC CACCAGCGCG AAGATGACAG CGAGCCAGGG CGAATCACCT TGCGCACCCG GCTCAATCCG CCGTGGGCCG AGATTCAGGT CGAGGACAAC GGCATCGGCA TGAGCGAGAA CGTGCGCAAG CGCACCTTCG AGCCGTTCTT CACCACCAAG GAAATCGGCC AGGGCACGGG CCTCGGGCTG TCGGTGTCGT ACTTCATCAT CACCAACAAC CACAAAGGCC AGATGGAAGT GCAGTCGGCG CCGGGGCAAG GCACCTGCTT CACCCTGCGC CTGCCACTGG CGCAACCGGC GCCCATCGCC GCCGAAACCA ATCAACTACC GAGGTAA
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Protein sequence | MPLRQRLENL PVGQKLLAAL LVLLTTVLLV ANLTFISAAY YISQESMAPQ ALQTIGRLVS NPSLVAEALQ SPQSAERLLK ELDSYSPLRA AALYDGKGER LAQLQHGDKL NLPERYRHIE AWQLTEFRSN QLITLPRPGT APGHLLLVAS SELPVAFYTG TLTASLGILI FSVLLWLVIA RQIKRLITRP IHQLEELSRQ VTREENYALR ASRGNHDEIG SLAEAFNTML SRIEAREQQL KRARDDSQAA YDQAQGLAEE TRHTNRKLEL EVQVRSKIEK KLTGFQNYLN SIIDSMPSAL IALDEQLYVT QWNQEASALS GTRLDEALNQ PIFLAFEPLK PFLPQLKQTV EQHTVAKIER VTWFKDDEPK HYALTFYPLM GGAGRGVVIR IDDITQRLSL EEMMVQSEKM LSVGGLAAGM AHEINNPLGA ILHNVQNIRR RLSPDLPKNL EQAEQLGIEL DTVNRYLQGR EVPQLLDGIQ QAGARAAKIV THMLSFSRRS NRQMAPCDLP ALIDQAVEIA GNDFDLAIGF DFKGQAIIRQ FDPALGPVPG TANELEQVLL NLLKNAAQAI HQREDDSEPG RITLRTRLNP PWAEIQVEDN GIGMSENVRK RTFEPFFTTK EIGQGTGLGL SVSYFIITNN HKGQMEVQSA PGQGTCFTLR LPLAQPAPIA AETNQLPR
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