Gene Pfl01_4423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4423 
Symbol 
ID3713462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4979890 
End bp4981926 
Gene Length2037 bp 
Protein Length678 aa 
Translation table11 
GC content63% 
IMG OID 
Productmulti-sensor Signal transduction histidine kinase 
Protein accessionYP_350151 
Protein GI77460644 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTGC GCCAGCGTCT TGAAAACCTG CCGGTCGGCC AGAAACTGCT GGCCGCCCTG 
CTGGTGCTGT TGACCACCGT GTTGCTGGTC GCCAACCTGA CCTTTATCAG CGCCGCCTAT
TACATTTCCC AGGAAAGCAT GGCGCCCCAG GCGTTGCAGA CCATCGGCCG GCTGGTGTCG
AACCCGAGCC TGGTGGCCGA AGCCTTGCAA TCGCCACAAA GCGCCGAGCG TCTGCTCAAG
GAGCTCGACA GCTATTCTCC GCTGCGTGCA GCCGCTTTAT ATGACGGCAA AGGCGAACGT
CTGGCGCAGT TGCAACACGG CGACAAACTC AACCTGCCGG AACGCTACCG GCACATCGAA
GCCTGGCAAC TGACCGAGTT TCGCAGCAAT CAACTGATCA CCCTGCCCCG CCCCGGCACC
GCGCCGGGCC ATCTGTTGCT GGTGGCCAGC AGCGAGCTGC CGGTGGCGTT CTATACCGGC
ACACTCACGG CCAGCCTGGG GATCCTGATT TTCAGTGTGC TGCTGTGGCT GGTCATCGCC
CGGCAGATCA AGCGCCTGAT CACCCGGCCG ATTCATCAAC TGGAAGAACT GTCCCGTCAG
GTAACCCGCG AGGAGAACTA TGCCCTGCGC GCCTCCCGGG GCAACCATGA CGAAATCGGC
AGCCTCGCCG AAGCGTTCAA CACCATGCTG TCGCGCATCG AGGCGAGGGA GCAGCAACTC
AAGCGTGCCC GCGATGATTC CCAGGCGGCT TACGATCAGG CCCAGGGGCT GGCCGAAGAA
ACCCGCCACA CCAACCGCAA GCTGGAACTG GAAGTCCAGG TGCGCAGCAA GATCGAGAAG
AAACTCACCG GGTTCCAGAA CTACCTCAAC AGCATCATCG ACTCCATGCC CTCGGCGCTG
ATCGCCCTCG ACGAACAGCT CTACGTCACG CAGTGGAACC AGGAGGCCAG CGCCCTTTCC
GGTACACGAC TGGACGAAGC GCTTAACCAG CCGATCTTCC TCGCGTTCGA GCCGCTCAAG
CCGTTCCTGC CGCAACTCAA GCAGACCGTC GAACAGCACA CTGTGGCGAA AATCGAGCGG
GTGACGTGGT TCAAGGACGA CGAGCCCAAG CACTACGCCC TCACCTTCTA CCCGTTGATG
GGCGGTGCCG GGCGCGGCGT GGTGATCCGG ATCGACGACA TCACCCAGCG CCTGTCGCTG
GAAGAAATGA TGGTGCAGTC GGAGAAAATG CTGTCGGTCG GTGGCCTCGC CGCCGGCATG
GCCCACGAGA TCAATAACCC GCTGGGGGCG ATCCTGCACA ACGTGCAGAA CATTCGCCGA
CGCCTGTCGC CGGACCTGCC GAAGAACCTC GAGCAGGCCG AGCAACTGGG CATCGAACTC
GATACCGTGA ACCGTTATCT GCAAGGCCGG GAAGTCCCGC AACTGCTCGA CGGCATTCAG
CAGGCCGGCG CCCGGGCGGC GAAAATCGTC ACCCACATGC TCAGTTTCAG CCGTCGCAGC
AACCGCCAGA TGGCGCCGTG CGACCTGCCG GCGCTGATCG ATCAAGCCGT GGAAATCGCC
GGCAACGACT TCGACCTGGC CATCGGCTTC GACTTTAAGG GGCAGGCGAT CATTCGCCAG
TTCGACCCGG CGCTGGGCCC GGTGCCCGGC ACTGCCAACG AACTGGAACA GGTGCTGCTG
AACCTGCTGA AAAACGCCGC GCAGGCGATC CACCAGCGCG AAGATGACAG CGAGCCAGGG
CGAATCACCT TGCGCACCCG GCTCAATCCG CCGTGGGCCG AGATTCAGGT CGAGGACAAC
GGCATCGGCA TGAGCGAGAA CGTGCGCAAG CGCACCTTCG AGCCGTTCTT CACCACCAAG
GAAATCGGCC AGGGCACGGG CCTCGGGCTG TCGGTGTCGT ACTTCATCAT CACCAACAAC
CACAAAGGCC AGATGGAAGT GCAGTCGGCG CCGGGGCAAG GCACCTGCTT CACCCTGCGC
CTGCCACTGG CGCAACCGGC GCCCATCGCC GCCGAAACCA ATCAACTACC GAGGTAA
 
Protein sequence
MPLRQRLENL PVGQKLLAAL LVLLTTVLLV ANLTFISAAY YISQESMAPQ ALQTIGRLVS 
NPSLVAEALQ SPQSAERLLK ELDSYSPLRA AALYDGKGER LAQLQHGDKL NLPERYRHIE
AWQLTEFRSN QLITLPRPGT APGHLLLVAS SELPVAFYTG TLTASLGILI FSVLLWLVIA
RQIKRLITRP IHQLEELSRQ VTREENYALR ASRGNHDEIG SLAEAFNTML SRIEAREQQL
KRARDDSQAA YDQAQGLAEE TRHTNRKLEL EVQVRSKIEK KLTGFQNYLN SIIDSMPSAL
IALDEQLYVT QWNQEASALS GTRLDEALNQ PIFLAFEPLK PFLPQLKQTV EQHTVAKIER
VTWFKDDEPK HYALTFYPLM GGAGRGVVIR IDDITQRLSL EEMMVQSEKM LSVGGLAAGM
AHEINNPLGA ILHNVQNIRR RLSPDLPKNL EQAEQLGIEL DTVNRYLQGR EVPQLLDGIQ
QAGARAAKIV THMLSFSRRS NRQMAPCDLP ALIDQAVEIA GNDFDLAIGF DFKGQAIIRQ
FDPALGPVPG TANELEQVLL NLLKNAAQAI HQREDDSEPG RITLRTRLNP PWAEIQVEDN
GIGMSENVRK RTFEPFFTTK EIGQGTGLGL SVSYFIITNN HKGQMEVQSA PGQGTCFTLR
LPLAQPAPIA AETNQLPR