Gene Pfl01_4378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4378 
Symbol 
ID3715106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4933121 
End bp4934086 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content65% 
IMG OID 
Productputative FecR 
Protein accessionYP_350106 
Protein GI77460599 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.620498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.854602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGACA CCCACCGCTC CCCTTCGCCT TCATCGGCGC AGGACGCCGC CAGCGCAATG 
GACCAGGCTC TGGACTGGCT CATCGTGCTC GGCAGTCCGG ACGAGGAGCA GACCCGGCAA
TTCCATGCCT GGCTGGCGGC CGATCCGTTG AATGCCGAGG CGTTCGCCAG GGCCCAGGCA
ATCTGGGACG GCCCGCAGAT CGCCCAGTGC GCGCAGAACC TCGCGGCCAA ACCGAAGAAA
GTCACCGTCC TCACACGTCT GCGCCCGCAC TGGAAACCGC TGGCCACCGC CGCGGTGCTG
CTGCTCGGGC TATTCAGTTT CAGCGACCTG CCGATGCGTC TGCAGGCCGA TCACCTGACC
GTGGTCGGCG AGCGTCAGCG CTTGCAGCTC GAGGACGGTT CGAAGGTCCT GCTCAACACT
AACTCCGCCT TCTCCAGCAC GATCAACGAT CAGCAGCGGG TCGCGCGGCT GTATCAGGGC
GAAGCATTTT TCGAGATTCC GGCCAGCCGC AGTCAGCCGC TGGAAATCGA CGCCGGCCCG
GTGAAAGCCA GCGTGCGCGA CACCGCGTTC GCCGTACGTT ATCTCGACGG CGTGGCGCAG
GTGCGGGTGC AGCGTGGCGA TGTCGATCTG CGTGCGACCC GTGATGATGC ACGGGTGCGG
CTGTCCGCCG GAGAAAGCAT CCGCATCGGC CCGAACGGTT TCGACCACCC GGCCAAGGTC
GACGCCGCTA CCGATCTGGC GTGGGTGCAG GGTCGGCTGA TCTTCGAGAA CTGCCCGCTG
AACCAGGTGC TGGCGGAACT GCGCCGCTAC TATCCGGGCT TCATCATCAA CACCAACGAA
CAGTTAGCCG ACGTCGCCGT CACTGGCAAT TACCGTCTCG ACCAGCCGCT GGACGTGGTG
CGTTCGCTCG CTCACATCAC CTCGGCCAAG CTTCAGGAAT TCCCAGCGCT GGTGATTCTG
AACTAA
 
Protein sequence
MTDTHRSPSP SSAQDAASAM DQALDWLIVL GSPDEEQTRQ FHAWLAADPL NAEAFARAQA 
IWDGPQIAQC AQNLAAKPKK VTVLTRLRPH WKPLATAAVL LLGLFSFSDL PMRLQADHLT
VVGERQRLQL EDGSKVLLNT NSAFSSTIND QQRVARLYQG EAFFEIPASR SQPLEIDAGP
VKASVRDTAF AVRYLDGVAQ VRVQRGDVDL RATRDDARVR LSAGESIRIG PNGFDHPAKV
DAATDLAWVQ GRLIFENCPL NQVLAELRRY YPGFIINTNE QLADVAVTGN YRLDQPLDVV
RSLAHITSAK LQEFPALVIL N