Gene Pfl01_4274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4274 
Symbol 
ID3712886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4821551 
End bp4822792 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content59% 
IMG OID 
Productaspartate kinase 
Protein accessionYP_350002 
Protein GI77460495 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0000967452 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTGA TCGTACAGAA ATTTGGAGGC ACCTCGGTCG GCACTGTCGA GAGAATCGAG 
CAGGTCGCCG ACAAGGTTAA GAAATTCCGC GATGCCGGCG ATGACCTGGT GGTTGTGCTG
TCTGCAATGA GCGGCGAAAC CAACCGTCTG ATCGATCTGG CCAAGCAAAT CAGTGGCGAA
GATCAACCGG TTCCGCGCGA ACTGGATGTG ATCGTTTCCA CAGGTGAGCA GGTGACGATC
GCCCTGTTGG CCATGGCGCT GATCAAGCGC GGTGTGCCGG CGGTGTCGTA CACCGGCAAC
CAGGTGCGGA TTCTGACGGA CAGTGCGCAC AATAAAGCGC GTATCTTGCA GATTGATGAC
CAGAAGATTC GCGGTGACCT GAAAGCCGGT CGCGTGGTGG TGGTCGCTGG TTTCCAGGGC
GTCGACGAGC ACGGCAACAT CACGACCCTG GGTCGTGGCG GTTCCGACAC CACCGGTGTG
GCGCTGGCCG CTGCGCTGAA GGCTGACGAG TGCCAGATCT ACACCGACGT CGATGGTGTC
TACACCACTG ACCCGCGTGT GGTATCGGTT GCTCAGCGTC TGGACAAGAT CACCTTCGAA
GAGATGCTGG AAATGGCCAG CCTCGGTTCC AAGGTGCTGC AGATCCGTGC GGTGGAATTC
GCCGGCAAGT ACAACGTTCC GCTGCGCGTA CTGCACAGCT TCAAGGAGGG TCCGGGCACC
CTCATTACTA TTGATGAAGA GGAAACCATG GAACAGCCGA TCATTTCCGG CATCGCTTTC
AACCGCGATG AAGCCAAGCT GACCATCCGT GGCGTGCCAG ACACCCCGGG CGTGGCGTTC
AAGATTCTCG GCCCGATCAG TGCCGCGAAC ATCGAAGTCG ACATGATCGT GCAGAACGTC
GCGCACGATA ACACCACCGA CTTCACCTTC ACCGTGCACC GCAACGACTA CCAGTCCGCG
CAAACCGTGC TGGAAAACAC CGCTCGCGAG ATCGGTGCCC GTGAAGTGGT GGGCGATACC
AAGATTGCCA AGGTCTCGAT CGTCGGCGTC GGCATGCGTT CCCACGCAGG CGTGGCCAGC
CGCATGTTTG AATCCCTGGC AAAAGAAAGC ATCAACATCC AGATGATCTC GACCTCGGAA
ATCAAGGTTT CCGTGGTGAT CGAAGAGAAG TACCTGGAAC TGGCCGTGCG CGCCCTGCAC
ACGGCTTTCG AACTCGACGC TCCGGCCCGT CAGGGCGAGT GA
 
Protein sequence
MALIVQKFGG TSVGTVERIE QVADKVKKFR DAGDDLVVVL SAMSGETNRL IDLAKQISGE 
DQPVPRELDV IVSTGEQVTI ALLAMALIKR GVPAVSYTGN QVRILTDSAH NKARILQIDD
QKIRGDLKAG RVVVVAGFQG VDEHGNITTL GRGGSDTTGV ALAAALKADE CQIYTDVDGV
YTTDPRVVSV AQRLDKITFE EMLEMASLGS KVLQIRAVEF AGKYNVPLRV LHSFKEGPGT
LITIDEEETM EQPIISGIAF NRDEAKLTIR GVPDTPGVAF KILGPISAAN IEVDMIVQNV
AHDNTTDFTF TVHRNDYQSA QTVLENTARE IGAREVVGDT KIAKVSIVGV GMRSHAGVAS
RMFESLAKES INIQMISTSE IKVSVVIEEK YLELAVRALH TAFELDAPAR QGE