Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4271 |
Symbol | |
ID | 3717863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4818240 |
End bp | 4819682 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | divalent cation transporter |
Protein accession | YP_349999 |
Protein GI | 77460492 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000733148 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAA TCGAAGTAAA GAAAACACAG GAAAGCCTGC AGGATCGCTT GGCTCAGGTC GTCGAGCTGC TGCAGCGCCA GCGGGTCGTC GAAGACCTGA CTCATCGCCA GGAAGGCCCG CATCATGACC GGGTCGAGAA CCTGGTCCAC CGGCAAAACC TCGTCGAGCT GCAACGCAAG CTCGATGATC TGCACTCCGC CGACGTCGCC TACATTCTTG AAGCCCTGCC GCTGGACGAT CGTCTGACGC TCTGGCAGCT GGTCAAGGCC GATCGCGACG GCGACATTCT TCTCGAAGTA TCCGATTCCG TCCGTGAAAC GCTGATCGCC GACATGGACG ATCATGAGCT CCTGGCTGCG GCCAAGGACA TGGATGCCGA CGAACTTGCT GACCTGGCCT CCGAGCTGCC GCGAGACGTC GTCCATGAGC TGATGGAGAC TCTGGATCAG CAGCAACGTG AGCGTGTGCG TTCGGCTCTC TCCTACGATG AGGAGCAGGT CGGTGCGCTG ATGGACTTCG AGATGGTGAC CATCCGTGAG GACGTCAGTC TTGAAGTGGT TCTGCGTTAC CTGCGCCGCC TGAAAGAGCT GCCGGGTCAT ACCGACAAAC TGTTCGTCGT CGACTACGAC GGCGTGCTCA AGGGCGTGCT GCCAATCAAG CGTTTGCTGG TCAATGATCC GGAAAAACAG GTTTCCGAAG TCATGGCCAG TGATCCGGTG AGTTTTCATC CGGATGAAGA TGCCTACGAC GCCGCTCAGG CGTTCGAACG TTACGACTTG ATCTCGGCCC CGGTGGTCGA CAAGAACGGC AAGCTGATCG GCCGTCTGAC CATCGACGAA ATGGTCGACC TGATTCGTGA GGAGAGCGAA AGCGAAGTCC TCAACATGGC GGGTCTGCGC GAAGAAGAAG ACATTTTCGC TTCGGTCTGG AAGTCCCTGC GCAACCGTTG GGCGTGGCTG GCGATCAACC TGATCACAGC ATTCGTCGCT TCGCGGGTGA TCGGTCTGTT CGAAGGTTCA ATCGAGAAGC TGGTGGCTCT GGCGGCGCTG ATGCCGATCG TTGCGGGCAT TGGCGGCAAC TCGGGCAACC AGACGATCAC CATGATCGTT CGCGCCATGG CGCTCGACCA GGTCAGCACC GGCAACACCT CGCGCCTGAT GCGCAAGGAA CTGGCCGTGG CGTTGATCAA CGGCCTGGTC TGGGGCGGTG TGATCGGTGT GGTGGCTTAC ATGCTCTACG GTAGTTGGTC GCTGGGCGTG GTGATGACGG CCGCCATGAC GCTCAATCTG CTGCTGGCAG CGTTGATGGG GGTGTTGATC CCGATGACGC TGGCCAAGAT GGGTCGCGAT CCGGCGATGG GCGCCAGTGT GATGATCACG GCCATGACCG ACAGTGGTGG CTTCTTCATC TTCCTGGGGC TGGCGACGAT TTTCCTGCTC TGA
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Protein sequence | MSEIEVKKTQ ESLQDRLAQV VELLQRQRVV EDLTHRQEGP HHDRVENLVH RQNLVELQRK LDDLHSADVA YILEALPLDD RLTLWQLVKA DRDGDILLEV SDSVRETLIA DMDDHELLAA AKDMDADELA DLASELPRDV VHELMETLDQ QQRERVRSAL SYDEEQVGAL MDFEMVTIRE DVSLEVVLRY LRRLKELPGH TDKLFVVDYD GVLKGVLPIK RLLVNDPEKQ VSEVMASDPV SFHPDEDAYD AAQAFERYDL ISAPVVDKNG KLIGRLTIDE MVDLIREESE SEVLNMAGLR EEEDIFASVW KSLRNRWAWL AINLITAFVA SRVIGLFEGS IEKLVALAAL MPIVAGIGGN SGNQTITMIV RAMALDQVST GNTSRLMRKE LAVALINGLV WGGVIGVVAY MLYGSWSLGV VMTAAMTLNL LLAALMGVLI PMTLAKMGRD PAMGASVMIT AMTDSGGFFI FLGLATIFLL
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