Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4223 |
Symbol | |
ID | 3717723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4768383 |
End bp | 4769372 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | D-lactate dehydrogenase |
Protein accession | YP_349951 |
Protein GI | 77460444 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.445075 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.469815 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACGA TCGTTTTCAG CAGCCAGTCC TACGACCGCG ACAGTTTCCT CGCCGCCGAC TGCCCGGCCG GGATCGAACT GCATTTCCAG CCGGCCCGGC TCAGCCTCGA CACGGCCGCG CTGGCCGAAC ATCACGAGGT GGTCTGCGCG TTCATCAATG ATGACCTCAG CGCCCCGGTG CTCGAACGCC TGGCTGCGGG CGGGACACGC CTGATTGCCT TGCGTTCGGC CGGCTACAAC CATGTGGACC TGGCCGTCGC CAAACGCTTG GAGCTGGCCG TAGTGCGGGT ACCGGCCTAC TCGCCCCATG CGGTGGCCGA GCACGCGGTG GCGTTGATCC TCGCCCTCAA CCGACGCCTG CACCGTGCCT ACAACCGCAC CCGCGAAGGC GATTTCAGCC TGCACGGCCT CACCGGTTTC GATCTGGTGG GCAAAACGGT CGGCATCGTC GGCACCGGAC AGATCGGCGC AACCTTCGCG AAGATCATGC ACGGCTTCGG CTGTGAATTG CTGGCCTACG ACCCGTATCC AAATCCTGCC GTCGAAGCGT TGGGCGCACG CTACCTGAGC CTGCCGGATC TGTTGGCGCA GTCGCGGATC ATCAGCCTGC ACTGCCCGCT CAACGAACAG AGCAGACACC TGATCAACCG CGATTCGCTG GCGCACATGC AACCGGGGGC GATGCTGATC AACACCGGGC GCGGCGGTCT GGTGGACACG CCGGCGCTGA TCGACGCCCT GAAAGACGGT CAGCTCGGTT ATCTGGGACT GGATGTGTAT GAAGAGGAAG CGCAGCTGTT TTTCGAGGAC CGCTCCGACC TGCCGCTACA GGACGACGTG CTGGCGCGGC TGCTGACGTT CCCGAATGTG ATCGTCACCG CGCATCAGGC GTTCCTGACC CATGAGGCGC TGGGCGCGAT TGCCGCGACC ACCTTGCACA ACATCGCGAC CTGGGCGACG GGCACGCCGC AGAACCAGGT CGAAGGCTGA
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Protein sequence | MRTIVFSSQS YDRDSFLAAD CPAGIELHFQ PARLSLDTAA LAEHHEVVCA FINDDLSAPV LERLAAGGTR LIALRSAGYN HVDLAVAKRL ELAVVRVPAY SPHAVAEHAV ALILALNRRL HRAYNRTREG DFSLHGLTGF DLVGKTVGIV GTGQIGATFA KIMHGFGCEL LAYDPYPNPA VEALGARYLS LPDLLAQSRI ISLHCPLNEQ SRHLINRDSL AHMQPGAMLI NTGRGGLVDT PALIDALKDG QLGYLGLDVY EEEAQLFFED RSDLPLQDDV LARLLTFPNV IVTAHQAFLT HEALGAIAAT TLHNIATWAT GTPQNQVEG
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