| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4198 |
|---|
| Symbol | |
|---|
| ID | 3717618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 4738763 |
|---|
| End bp | 4739812 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | periplasmic sensor Signal transduction histidine kinase |
|---|
| Protein accession | YP_349926 |
|---|
| Protein GI | 77460419 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGCGC GCTTCGACAC GCTGTTCGGC CGCCTGTTTG GCATGCTGTT GGTGGCGATC
GTCCTGGCGC ACTTGCTGGC CTTCGCCTGG TTCCGCCTCT ACGGCCCGCC CCCCCCGCCC
CCCCCGCCGG AGTTCTCGCA AAACCTCGAC GGTCAACAGC CGGCTCAGGA TCCACGCTAC
CCGCCCCGTC CACCGCGCCC CTGGTTCGGC GGGCCGATCG TGCCGCTGAC CTTCCAGTTC
ATTTCGCTGA TCATCGCCGC CTGGTACGGC GCCAAGCTGC TGACCCGGCC GATCCAGCGC
CTGAGCGATG CCGCCGAGCG CCTGAGCGAA GACCTCGACA GCCCGCCGCT GGACGAAACC
GGCCCCCGGG AAGCCCGGCA GGCCGCACAC ACGTTCAACC TGATGCAACA CCGCATCCGC
GAACAGGTGC AGCAACGGGC ACGCATGCTC GGCGCCGTCT CCCACGACCT GCGCACCCCG
CTGTCGCGGC TGAAACTGCG CCTGGAAAAC ATCAACGACG ACAAGCTGCA GGGCCAGATG
CGCCAGGATC TGGACGACAT GATCGGCATG CTCGACGCCA CCCTCACCTA CCTGCACGAA
CAACGCACCA GCGAAGCGTT GCAGTTGATG GACGTGCAGG CGCTGGTCGA ATCACTGTGC
GAAAACGCCC AGGATCAAGG CGCCGACGTG CAGGTCAGCG GCCACTGCGC CCCGTTGCAG
GTACAGCCGA TGGCCCTGCG CTCGTGCATC AACAACCTGA TGGACAACGC CCTGCGCTAC
GCCGGCCAAG CGCACATCGA ACTGCAAGAC CAACGCGAAC AACTGCTGAT CCGCGTCATC
GACCACGGCC CGGGCATCGC GGCGGACAAG CGTGAAGCCG TGTTCGAACC GTTCTTCCGC
CTCGAAGGCT CACGCAATCG CAACTCCGGC GGCGTCGGCC TGGGCATGAC CATCGCCCGG
GAAGCCGCAC AGCGCCAAAG TGGCCAACTG ACCCTGGCAG AAACGCCCGG CGGCGGCCTG
ACCGCCGTGA TCCAACTGCC TCGCCGCTGA
|
|---|
| Protein sequence | MRARFDTLFG RLFGMLLVAI VLAHLLAFAW FRLYGPPPPP PPPEFSQNLD GQQPAQDPRY
PPRPPRPWFG GPIVPLTFQF ISLIIAAWYG AKLLTRPIQR LSDAAERLSE DLDSPPLDET
GPREARQAAH TFNLMQHRIR EQVQQRARML GAVSHDLRTP LSRLKLRLEN INDDKLQGQM
RQDLDDMIGM LDATLTYLHE QRTSEALQLM DVQALVESLC ENAQDQGADV QVSGHCAPLQ
VQPMALRSCI NNLMDNALRY AGQAHIELQD QREQLLIRVI DHGPGIAADK REAVFEPFFR
LEGSRNRNSG GVGLGMTIAR EAAQRQSGQL TLAETPGGGL TAVIQLPRR
|
|---|
| |